RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 TM9SF3Q9HD45 589 aa16.52■□□□□ 0.24
CD40-207ENST00000620709 TM7SF3Q9NS93 570 aa16.52■□□□□ 0.24
CD40-207ENST00000620709 PACSIN2Q9UNF0 486 aaPredicted RBP16.52■□□□□ 0.24
CD40-207ENST00000620709 FNDC3AQ9Y2H6 1198 aaKnown RBP16.52■□□□□ 0.24
CD40-207ENST00000620709 SNX11Q9Y5W9 270 aa16.52■□□□□ 0.24
CD40-207ENST00000620709 EDDM13A0A1B0GTR0 161 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 TCRBV5S1A1TA0A578 114 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 TMEM110-MUSTN1A8MSY1 372 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 MYO1FO00160 1098 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 SRGAP2O75044 1071 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 GLI1P08151 1106 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 MZF1P28698 734 aaPredicted RBP16.51■□□□□ 0.23
CD40-207ENST00000620709 SLC8A1P32418 973 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 GABRB2P47870 512 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 CKAP4Q07065 602 aaKnown RBP16.51■□□□□ 0.23
CD40-207ENST00000620709 SFSWAPQ12872 951 aaKnown RBP16.51■□□□□ 0.23
CD40-207ENST00000620709 KIF19Q2TAC6 998 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 C9orf64Q5T6V5 341 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 HES6Q96HZ4 224 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 SIK2Q9H0K1 926 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 ASNSD1Q9NWL6 643 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 SERGEFQ9UGK8 458 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 VANGL2Q9ULK5 521 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 SCML1Q9UN30 329 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 ALG6Q9Y672 507 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 ASPMQ8IZT6 3477 aa16.51■□□□□ 0.23
CD40-207ENST00000620709 TARSL2A2RTX5 802 aaKnown RBP16.5■□□□□ 0.23
CD40-207ENST00000620709 GOLGA8CPA6NN73 597 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 MIF4GDA9UHW6 222 aaKnown RBP16.5■□□□□ 0.23
CD40-207ENST00000620709 M0QYT0 321 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 CES2O00748 559 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 TRIM16O95361 564 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 IL1BP01584 269 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 CD27P26842 260 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 SLC6A3Q01959 620 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 ZNF423Q2M1K9 1284 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 ACCSLQ4AC99 568 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 TTC39BQ5VTQ0 682 aaPredicted RBP16.5■□□□□ 0.23
CD40-207ENST00000620709 KIAA0895LQ68EN5 471 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 FBXL22Q6P050 247 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 XYLT1Q86Y38 959 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 C1orf216Q8TAB5 229 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 IGSF8Q969P0 613 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 BTBD6Q96KE9 485 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 PRMT1Q99873 361 aaKnown RBP16.5■□□□□ 0.23
CD40-207ENST00000620709 SELENOOQ9BVL4 669 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 NEUROG2Q9H2A3 272 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 ZMIZ1Q9ULJ6 1067 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 ANKRD6Q9Y2G4 727 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 IGF2RP11717 2491 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 UQCRHLA0A096LP55 91 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.5■□□□□ 0.23
CD40-207ENST00000620709 A0A1B0GVM2 712 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 TCAF2A6NFQ2 919 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 SPOPO43791 374 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 DAB1O75553 588 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 UQCRHP07919 91 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 FTH1P19P0C7X4 201 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 VAV1P15498 845 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 COMTP21964 271 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 SLC1A1P43005 524 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 DNA2P51530 1060 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 C21orf59P57076 290 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 ZNF177Q13360 481 aaPredicted RBP16.5■□□□□ 0.23
CD40-207ENST00000620709 AUHQ13825 339 aaKnown RBP16.5■□□□□ 0.23
CD40-207ENST00000620709 DCUN1D2Q6PH85 259 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 NCEH1Q6PIU2 408 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 OLFML1Q6UWY5 402 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 USP30Q70CQ3 517 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 KDM1BQ8NB78 822 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 RHBDD1Q8TEB9 315 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 PBKQ96KB5 322 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 CAPZA3Q96KX2 299 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 PSMB7Q99436 277 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 RNF14Q9UBS8 474 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 IP6K2Q9UHH9 426 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 SLC25A13Q9UJS0 675 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 PCOLCE2Q9UKZ9 415 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 NEUROG3Q9Y4Z2 214 aa16.5■□□□□ 0.23
CD40-207ENST00000620709 LRRC72A6NJI9 287 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 BNIP3LO60238 219 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 PROSCO94903 275 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 CXCR5P32302 372 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 MAN1A1P33908 653 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 NOS2P35228 1153 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 SULT1E1P49888 294 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 IRAK1P51617 712 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 IL9RQ01113 521 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 EIF4EBP2Q13542 120 aaPredicted RBP16.49■□□□□ 0.23
CD40-207ENST00000620709 SLC12A1Q13621 1099 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 PPP1R15BQ5SWA1 713 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 UBL4BQ8N7F7 174 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 OR14C36Q8NHC7 312 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 COG1Q8WTW3 980 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 MCEEQ96PE7 176 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 FAM129BQ96TA1 746 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 HS3ST4Q9Y661 456 aa16.49■□□□□ 0.23
CD40-207ENST00000620709 CFAP47Q6ZTR5 3102 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 KNL1Q8NG31 2342 aa16.48■□□□□ 0.23
CD40-207ENST00000620709 TMEM131Q92545 1883 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms