RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 RETSATQ6NUM9 610 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 ADIPOR2Q86V24 386 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 IFT20Q8IY31 132 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 ZNF567Q8N184 647 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 GPR161Q8N6U8 529 aaKnown RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 CNTD1Q8N815 330 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 DCAF4L2Q8NA75 395 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 CCDC110Q8TBZ0 833 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 WFIKKN2Q8TEU8 576 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 TTC17Q96AE7 1141 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 LRRC45Q96CN5 670 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 SPATA13Q96N96 652 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 HINFPQ9BQA5 517 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 TRIM51Q9BSJ1 452 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 C2orf49Q9BVC5 232 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 EPC1Q9H2F5 836 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 ANKZF1Q9H8Y5 726 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 SP110Q9HB58 689 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 PDFQ9HBH1 243 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 EPB41L5Q9HCM4 733 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 PRDM6Q9NQX0 595 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 GDF3Q9NR23 364 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 DNAJC17Q9NVM6 304 aaKnown RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 SEPT10Q9P0V9 454 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 PAK5Q9P286 719 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 UBA2Q9UBT2 640 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 VPS51Q9UID3 782 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 GGA2Q9UJY4 613 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 SNX24Q9Y343 169 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 V9GYY5 206 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 METTL18O95568 372 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 TUBBP07437 444 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 IL9P15248 144 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 POLR2EP19388 210 aaKnown RBP8.17□□□□□ -1.1
CPNE3-209ENST00000620393 CD68P34810 354 aaPredicted RBP8.17□□□□□ -1.1
CPNE3-209ENST00000620393 OPRD1P41143 372 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 EIF2DP41214 584 aaKnown RBP8.17□□□□□ -1.1
CPNE3-209ENST00000620393 VPS41P49754 854 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 TERF1P54274 439 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 GEMIN4P57678 1058 aaKnown RBP8.17□□□□□ -1.1
CPNE3-209ENST00000620393 GPS1Q13098 491 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 ZBTB17Q13105 803 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 LBRQ14739 615 aaKnown RBP8.17□□□□□ -1.1
CPNE3-209ENST00000620393 TRADDQ15628 312 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 KCTD19Q17RG1 926 aaPredicted RBP8.17□□□□□ -1.1
CPNE3-209ENST00000620393 GEN1Q17RS7 908 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 PREPLQ4J6C6 727 aaPredicted RBP8.17□□□□□ -1.1
CPNE3-209ENST00000620393 FAM182AQ5T1J6 154 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 TMEM215Q68D42 235 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 MBLAC2Q68D91 279 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 GRAMD4Q6IC98 578 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 LEKR1Q6ZMV7 388 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 ARHGEF18Q6ZSZ5 1173 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 PCGF5Q86SE9 256 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 C12orf40Q86WS4 652 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 AHI1Q8N157 1196 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 BBS5Q8N3I7 341 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 BBOF1Q8ND07 529 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 TTC8Q8TAM2 541 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 CSGALNACT1Q8TDX6 532 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 USP33Q8TEY7 942 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 CASKIN2Q8WXE0 1202 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 RUBCNQ92622 972 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 AGAP3Q96P47 875 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 PNKPQ96T60 521 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 PARD6BQ9BYG5 372 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 ETNK1Q9HBU6 452 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 GLOD4Q9HC38 313 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 FAM114A2Q9NRY5 505 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 WHRNQ9P202 907 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 KLHL8Q9P2G9 620 aaPredicted RBP8.17□□□□□ -1.1
CPNE3-209ENST00000620393 PRKAG3Q9UGI9 489 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 SEPT3Q9UH03 358 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 ASIC3Q9UHC3 531 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 TPX2Q9ULW0 747 aaKnown RBP8.17□□□□□ -1.1
CPNE3-209ENST00000620393 ATP8A1Q9Y2Q0 1164 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 SZT2Q5T011 3432 aa8.17□□□□□ -1.1
CPNE3-209ENST00000620393 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.16□□□□□ -1.1
CPNE3-209ENST00000620393 DNALI1O14645 258 aaPredicted RBP8.16□□□□□ -1.1
CPNE3-209ENST00000620393 NDC80O14777 642 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 NEBLO76041 1014 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 MT-CO1P00395 513 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 ATP5BP06576 529 aaKnown RBP8.16□□□□□ -1.1
CPNE3-209ENST00000620393 ASGR2P07307 311 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 GLULP15104 373 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 CES1P23141 567 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 FDFT1P37268 417 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 HSPA9P38646 679 aaKnown RBP8.16□□□□□ -1.1
CPNE3-209ENST00000620393 GRIA2P42262 883 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 CTSOP43234 321 aaPredicted RBP8.16□□□□□ -1.1
CPNE3-209ENST00000620393 MMP13P45452 471 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 RPL21P46778 160 aaKnown RBP8.16□□□□□ -1.1
CPNE3-209ENST00000620393 NUMBP49757 651 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 GALK1P51570 392 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 ECT2LQ008S8 904 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 PFKPQ01813 784 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 NSUN2Q08J23 767 aaKnown RBP eCLIP8.16□□□□□ -1.1
CPNE3-209ENST00000620393 TDGQ13569 410 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 CUL1Q13616 776 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms