RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 PSMB7Q99436 277 aa12.18□□□□□ -0.46
UPF3B-204ENST00000619445 SPON2Q9BUD6 331 aa12.18□□□□□ -0.46
UPF3B-204ENST00000619445 NRSN2Q9GZP1 204 aa12.18□□□□□ -0.46
UPF3B-204ENST00000619445 ATP13A1Q9HD20 1204 aa12.18□□□□□ -0.46
UPF3B-204ENST00000619445 KLHL11Q9NVR0 708 aa12.18□□□□□ -0.46
UPF3B-204ENST00000619445 HPCAL4Q9UM19 191 aa12.18□□□□□ -0.46
UPF3B-204ENST00000619445 NBEAQ8NFP9 2946 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 IGSF10Q6WRI0 2623 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 CHD5Q8TDI0 1954 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 A0A0D9SEW6 157 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 A0A1W2PQU0 124 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 NEMP2A6NFY4 417 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 ZSCAN5CA6NGD5 496 aaPredicted RBP12.17□□□□□ -0.46
UPF3B-204ENST00000619445 GOLGA8SH3BPF8 625 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 WNT9AO14904 365 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 AP1G1O43747 822 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 SNAP91O60641 907 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 SRGAP2O75044 1071 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 PCDH8O95206 1070 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 MT-CO1P00395 513 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 THEGLP0DJG4 465 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 DESP17661 470 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 MMP8P22894 467 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 RRM1P23921 792 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 ACP1P24666 158 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 ITGB7P26010 798 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 METAP1P53582 386 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 TAS2R38P59533 333 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 RPS21P63220 83 aaKnown RBP12.17□□□□□ -0.46
UPF3B-204ENST00000619445 CDR2Q01850 454 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 GNA12Q03113 381 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 CYP4F3Q08477 520 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 POLD3Q15054 466 aaPredicted RBP12.17□□□□□ -0.46
UPF3B-204ENST00000619445 PRAMEF14Q5SWL7 426 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 NAA35Q5VZE5 725 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 FBXL19Q6PCT2 694 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 STRADAQ7RTN6 431 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 NOP9Q86U38 636 aaKnown RBP12.17□□□□□ -0.46
UPF3B-204ENST00000619445 SPATS2Q86XZ4 545 aaKnown RBP12.17□□□□□ -0.46
UPF3B-204ENST00000619445 RFFLQ8WZ73 363 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 RAB7BQ96AH8 199 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 FEM1CQ96JP0 617 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 HEPHQ9BQS7 1158 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 OSBPL2Q9H1P3 480 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 USP29Q9HBJ7 922 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 DONSONQ9NYP3 566 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 NCKIPSDQ9NZQ3 722 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 MPP6Q9NZW5 540 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 HS3ST3A1Q9Y663 406 aa12.17□□□□□ -0.46
UPF3B-204ENST00000619445 ASXL3Q9C0F0 2248 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 A0A087WV48 116 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 A6NNZ2 444 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 PLK4O00444 970 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 SLC31A1O15431 190 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 LEFTY1O75610 366 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 CTSLP07711 333 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 MMEP08473 750 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 RHOQP17081 205 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 TFE3P19532 575 aaPredicted RBP12.16□□□□□ -0.46
UPF3B-204ENST00000619445 L1CAMP32004 1257 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 ADRA1BP35368 520 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 PTPN9P43378 593 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 NUMBP49757 651 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 SYCP1Q15431 976 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 ZNF284Q2VY69 593 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 POM121L1PQ3SYA9 428 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 CARD16Q5EG05 197 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 ARSIQ5FYB1 569 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 DPY19L3Q6ZPD9 716 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 KANSL1Q7Z3B3 1105 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 FAM131BQ86XD5 332 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 OR4C6Q8NH72 309 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 GRIN3AQ8TCU5 1115 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 CPA5Q8WXQ8 436 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 CFAP57Q96MR6 1250 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 DUSP23Q9BVJ7 150 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 OSBPL1AQ9BXW6 950 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 MAGEH1Q9H213 219 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 SAMSN1Q9NSI8 373 aaKnown RBP12.16□□□□□ -0.46
UPF3B-204ENST00000619445 ZNF212Q9UDV6 495 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 OR12D3Q9UGF7 316 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 RAXQ9Y2V3 346 aa12.16□□□□□ -0.46
UPF3B-204ENST00000619445 TDRD6O60522 2096 aaKnown RBP12.15□□□□□ -0.46
UPF3B-204ENST00000619445 FAM149AA5PLN7 773 aa12.15□□□□□ -0.46
UPF3B-204ENST00000619445 ANKRD62A6NC57 917 aa12.15□□□□□ -0.46
UPF3B-204ENST00000619445 H3BM21 787 aa12.15□□□□□ -0.46
UPF3B-204ENST00000619445 I6L893 689 aaPredicted RBP12.15□□□□□ -0.46
UPF3B-204ENST00000619445 K7ERQ8 282 aa12.15□□□□□ -0.46
UPF3B-204ENST00000619445 SMAD6O43541 496 aaKnown RBP12.15□□□□□ -0.46
UPF3B-204ENST00000619445 TSPAN6O43657 245 aa12.15□□□□□ -0.46
UPF3B-204ENST00000619445 ZMPSTE24O75844 475 aa12.15□□□□□ -0.46
UPF3B-204ENST00000619445 CYP1A1P04798 512 aaPredicted RBP12.15□□□□□ -0.46
UPF3B-204ENST00000619445 CALB1P05937 261 aa12.15□□□□□ -0.46
UPF3B-204ENST00000619445 CCDC172P0C7W6 258 aa12.15□□□□□ -0.46
UPF3B-204ENST00000619445 ADRB3P13945 408 aa12.15□□□□□ -0.46
UPF3B-204ENST00000619445 SOX5P35711 763 aa12.15□□□□□ -0.46
UPF3B-204ENST00000619445 STAT1P42224 750 aa12.15□□□□□ -0.46
UPF3B-204ENST00000619445 NSFP46459 744 aaKnown RBP12.15□□□□□ -0.46
UPF3B-204ENST00000619445 DUSP3P51452 185 aaPredicted RBP12.15□□□□□ -0.46
UPF3B-204ENST00000619445 GSCP56915 257 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms