RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ATXN3P54252 364 aaPredicted RBP7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 CCL23P55773 120 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 USP46P62068 366 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 LSAMPQ13449 338 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 SOWAHAQ2M3V2 549 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 SFT2D3Q587I9 215 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 FOXB2Q5VYV0 432 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 UNC5AQ6ZN44 842 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 LRRC8DQ7L1W4 858 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 SETD3Q86TU7 594 aaPredicted RBP7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 ADGRF2Q8IZF7 708 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 PQLC1Q8N2U9 271 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 FBXW8Q8N3Y1 598 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 AFAP1L2Q8N4X5 818 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 ACMSDQ8TDX5 336 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 RXFP2Q8WXD0 754 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 ITFG2Q969R8 447 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 ATXN7L3BQ96GX2 97 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 CCT7Q99832 543 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 EBNA1BP2Q99848 306 aaKnown RBP7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 MED10Q9BTT4 135 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 EFHD1Q9BUP0 239 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 CCDC106Q9BWC9 280 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 FAM126AQ9BYI3 521 aaPredicted RBP7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 DHX35Q9H5Z1 703 aaKnown RBP7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 CUEDC1Q9NWM3 386 aaPredicted RBP7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 GPATCH2LQ9NWQ4 482 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 TLK1Q9UKI8 766 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 LRFN2Q9ULH4 789 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 POMPQ9Y244 141 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 SSX2IPQ9Y2D8 614 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 SH3BP1Q9Y3L3 701 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 MGAMO43451 1857 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 CXorf49A8MYA2 514 aaPredicted RBP7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 PIRO00625 290 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 ZBTB24O43167 697 aaPredicted RBP7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 ZMPSTE24O75844 475 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 SELPP16109 830 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 ACAT1P24752 427 aaKnown RBP7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 CLCNKBP51801 687 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 SLC25A11Q02978 314 aaKnown RBP7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 DLG1Q12959 904 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 GOLGA7BQ2TAP0 167 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 ZFP1Q6P2D0 407 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 DNAAF3Q8N9W5 541 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 DBF4BQ8NFT6 615 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 CXorf38Q8TB03 319 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 MZB1Q8WU39 189 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 PPP1R36Q96LQ0 422 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 RNF157Q96PX1 679 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 MRPS26Q9BYN8 205 aaKnown RBP7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 ADA2Q9NZK5 511 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 KIAA1257Q9ULG3 409 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 PHF24Q9UPV7 400 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 LZTS1Q9Y250 596 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 TTLL3Q9Y4R7 772 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 NUMBLQ9Y6R0 609 aa7.11□□□□□ -1.27
SRGAP3-213ENST00000618999 SCN10AQ9Y5Y9 1956 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 TPP1O14773 563 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 HCRTO43612 131 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 ITGA2BP08514 1039 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 CSH1P0DML2 217 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 CSH2P0DML3 217 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 COX4I1P13073 169 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 CYP3A5P20815 502 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 LMO2P25791 158 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 SERPINB8P50452 374 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 ABCE1P61221 599 aaKnown RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 MRPS22P82650 360 aaKnown RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 IFRD2Q12894 506 aaPredicted RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 DCTN2Q13561 401 aaKnown RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 KCNJ11Q14654 390 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 MFSD4BQ5TF39 518 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 WSCD1Q658N2 575 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 BLOC1S3Q6QNY0 202 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 KYQ8NBH2 561 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 ACTRT2Q8TDY3 377 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 IFT43Q96FT9 208 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 DCUN1D1Q96GG9 259 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 TNIP3Q96KP6 325 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 SENP8Q96LD8 212 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 LPIN3Q9BQK8 851 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 PNPLA8Q9NP80 782 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 PSMD13Q9UNM6 376 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 HTTP42858 3142 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 A0A088AWK7 358 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 SDR42E2A6NKP2 422 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 CCNT2O60583 730 aaKnown RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 DGKIO75912 1065 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 PSMC3P17980 439 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 HSD3B2P26439 372 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 ADARP55265 1226 aaKnown RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 TAF5Q15542 800 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 ARSIQ5FYB1 569 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 PPP1R26Q5T8A7 1209 aaPredicted RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 SLC24A5Q71RS6 500 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 DEFB128Q7Z7B8 93 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 CRELD1Q96HD1 420 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 TSPAN18Q96SJ8 248 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 CPXM1Q96SM3 734 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms