RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 GATA5Q9BWX5 397 aaPredicted RBP4.4□□□□□ -1.7
SEC22B-202ENST00000618538 GCOM2Q9BZD3 368 aaPredicted RBP4.4□□□□□ -1.7
SEC22B-202ENST00000618538 ZNF385DQ9H6B1 395 aa4.4□□□□□ -1.7
SEC22B-202ENST00000618538 WDR55Q9H6Y2 383 aaPredicted RBP4.4□□□□□ -1.7
SEC22B-202ENST00000618538 GPAMQ9HCL2 828 aa4.4□□□□□ -1.7
SEC22B-202ENST00000618538 S100A14Q9HCY8 104 aa4.4□□□□□ -1.7
SEC22B-202ENST00000618538 CHRAC1Q9NRG0 131 aa4.4□□□□□ -1.7
SEC22B-202ENST00000618538 FLRT1Q9NZU1 646 aa4.4□□□□□ -1.7
SEC22B-202ENST00000618538 CPSF2Q9P2I0 782 aaKnown RBP4.4□□□□□ -1.7
SEC22B-202ENST00000618538 POMPQ9Y244 141 aa4.4□□□□□ -1.7
SEC22B-202ENST00000618538 TBC1D30Q9Y2I9 924 aa4.4□□□□□ -1.7
SEC22B-202ENST00000618538 MTF2Q9Y483 593 aaPredicted RBP4.4□□□□□ -1.7
SEC22B-202ENST00000618538 TIMM13Q9Y5L4 95 aaPredicted RBP4.4□□□□□ -1.7
SEC22B-202ENST00000618538 NYNRINQ9P2P1 1898 aaKnown RBP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 A0A096LPK6 155 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 GOLGA8QA0A0J9YX86 632 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 MYBPHLA2RUH7 354 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 GOLGA8OA6NCC3 632 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 TMEM233B4DJY2 109 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 TARM1B6A8C7 271 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 GOLGA8NF8WBI6 632 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 AURKAO14965 403 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 PHGDHO43175 533 aaKnown RBP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 ATP9BO43861 1147 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 TOMM70O94826 608 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 PGK1P00558 417 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 C2P06681 752 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 POLBP06746 335 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 USP17L7P0C7H9 530 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 ZCCHC18P0CG32 403 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 SLC35E2BP0CK96 405 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 CYP2C9P11712 490 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 PTPN1P18031 435 aaKnown RBP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 ACADSBP45954 432 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 TAF6P49848 677 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 MXRA7P84157 204 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 DEUP1Q05D60 604 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 SCAPQ12770 1279 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 KLF10Q13118 480 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 NAB1Q13506 487 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 GRB14Q14449 540 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 GRM3Q14832 879 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 PDK1Q15118 436 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 TBCCQ15814 346 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 DGKDQ16760 1214 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 INSCQ1MX18 579 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 RAB41Q5JT25 222 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 OLFML2BQ68BL8 750 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 FASTKD5Q7L8L6 764 aaKnown RBP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 OTOP3Q7RTS5 596 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 FAM35AQ86V20 835 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 PDSS2Q86YH6 399 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 PSTKQ8IV42 348 aaKnown RBP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 CEP97Q8IW35 865 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 DEFB107AQ8IZN7 70 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 SPATA6LQ8N4H0 392 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 HIPK4Q8NE63 616 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 SPATA22Q8NHS9 363 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 PPP1R14CQ8TAE6 165 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 HMGCLL1Q8TB92 370 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 KCTD13Q8WZ19 329 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 EDEM1Q92611 657 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 PCED1BQ96HM7 432 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 CELF6Q96J87 481 aaKnown RBP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 VPS39Q96JC1 886 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 MARK4Q96L34 752 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 PPP1R36Q96LQ0 422 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 GPR78Q96P69 363 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 LENG8Q96PV6 779 aaPredicted RBP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 CPNE1Q99829 537 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 UNKQ9C0B0 810 aaKnown RBP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 DNAI2Q9GZS0 605 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 CDH19Q9H159 772 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 GBA3Q9H227 469 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 SNX25Q9H3E2 840 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 STN1Q9H668 368 aaKnown RBP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 TNFRSF12AQ9NP84 129 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 MIOSQ9NXC5 875 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 NDE1Q9NXR1 346 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 RNF181Q9P0P0 153 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 KLHL8Q9P2G9 620 aaPredicted RBP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 DCDC2Q9UHG0 476 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 VANGL2Q9ULK5 521 aa4.4□□□□□ -1.71
SEC22B-202ENST00000618538 GNEQ9Y223 722 aaKnown RBP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 APOBEC2Q9Y235 224 aaKnown RBP4.4□□□□□ -1.71
SEC22B-202ENST00000618538 SMIM35A0A1B0GVV1 85 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 ARHGAP42A6NI28 874 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 STX16-NPEPL1H3BU86 382 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 DYNC1LI2O43237 492 aaPredicted RBP4.39□□□□□ -1.71
SEC22B-202ENST00000618538 LRIG2O94898 1065 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 FBXO21O94952 628 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 BAG2O95816 211 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 CD4P01730 458 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 ATP5BP06576 529 aaKnown RBP4.39□□□□□ -1.71
SEC22B-202ENST00000618538 FESP07332 822 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 SPATA31D3P0C874 917 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 GNAT1P11488 350 aa4.39□□□□□ -1.71
SEC22B-202ENST00000618538 SKIP12755 728 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms