RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SORCS1Q8WY21 1168 aa15.24■□□□□ 0.03
UBXN1-218ENST00000616865 AZIN2Q96A70 460 aa15.24■□□□□ 0.03
UBXN1-218ENST00000616865 NTAN1Q96AB6 310 aa15.24■□□□□ 0.03
UBXN1-218ENST00000616865 SNRNP25Q9BV90 132 aaKnown RBP15.24■□□□□ 0.03
UBXN1-218ENST00000616865 PCED1AQ9H1Q7 454 aa15.24■□□□□ 0.03
UBXN1-218ENST00000616865 DHX35Q9H5Z1 703 aaKnown RBP15.24■□□□□ 0.03
UBXN1-218ENST00000616865 GPATCH2LQ9NWQ4 482 aa15.24■□□□□ 0.03
UBXN1-218ENST00000616865 KIAA1522Q9P206 1035 aaPredicted RBP15.24■□□□□ 0.03
UBXN1-218ENST00000616865 EIF2B4Q9UI10 523 aaKnown RBP15.24■□□□□ 0.03
UBXN1-218ENST00000616865 FZD10Q9ULW2 581 aa15.24■□□□□ 0.03
UBXN1-218ENST00000616865 CAPN6Q9Y6Q1 641 aa15.24■□□□□ 0.03
UBXN1-218ENST00000616865 TYW5A2RUC4 315 aaKnown RBP15.23■□□□□ 0.03
UBXN1-218ENST00000616865 F5H5T6 163 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 FLRT2O43155 660 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 TACR2P21452 398 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 HOXD9P28356 352 aaPredicted RBP15.23■□□□□ 0.03
UBXN1-218ENST00000616865 SMTNL2Q2TAL5 461 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 RAP1GAP2Q684P5 730 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 C19orf48Q6RUI8 117 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 DBX2Q6ZNG2 339 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 FAM124AQ86V42 546 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 CPNE8Q86YQ8 564 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 PSTKQ8IV42 348 aaKnown RBP15.23■□□□□ 0.03
UBXN1-218ENST00000616865 LGI2Q8N0V4 545 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 C17orf53Q8N3J3 647 aaPredicted RBP15.23■□□□□ 0.03
UBXN1-218ENST00000616865 UBL4BQ8N7F7 174 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 LRRC57Q8N9N7 239 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 KCTD6Q8NC69 237 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 MDM1Q8TC05 714 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 TEKT4Q8WW24 435 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 PEBP4Q96S96 227 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 EPAS1Q99814 870 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 TMPRSS4Q9NRS4 437 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.23■□□□□ 0.03
UBXN1-218ENST00000616865 TOR4AQ9NXH8 423 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 DDX56Q9NY93 547 aaKnown RBP15.23■□□□□ 0.03
UBXN1-218ENST00000616865 PCDHGB2Q9Y5G2 931 aa15.23■□□□□ 0.03
UBXN1-218ENST00000616865 GOLGA6L7A0A1B0GV03 622 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 A0A1B0GVT2 93 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 CCDC66A2RUB6 948 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 MIF4GDA9UHW6 222 aaKnown RBP15.22■□□□□ 0.03
UBXN1-218ENST00000616865 DAPK3O43293 454 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 PSTPIP1O43586 416 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 TSPAN3O60637 253 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 SRGAP2O75044 1071 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 DKK1O94907 266 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 KRT1P04264 644 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 RARAP10276 462 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 HLA-EP13747 358 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 TCF4P15884 667 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 HLA-FP30511 346 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 AFF3P51826 1226 aaKnown RBP15.22■□□□□ 0.03
UBXN1-218ENST00000616865 TAS2R40P59535 323 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 GNG11P61952 73 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 SLC25A11Q02978 314 aaKnown RBP15.22■□□□□ 0.03
UBXN1-218ENST00000616865 CAMK2GQ13555 558 aaPredicted RBP15.22■□□□□ 0.03
UBXN1-218ENST00000616865 MPPE1Q53F39 396 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 PPP6R3Q5H9R7 873 aaPredicted RBP15.22■□□□□ 0.03
UBXN1-218ENST00000616865 MS4A13Q5J8X5 152 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 KCNT1Q5JUK3 1230 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 RABGAP1LQ5R372 815 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 LRRC38Q5VT99 294 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 TMPRSS7Q7RTY8 843 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 POLNQ7Z5Q5 900 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 MAP7D3Q8IWC1 876 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 CCDC117Q8IWD4 279 aaPredicted RBP15.22■□□□□ 0.03
UBXN1-218ENST00000616865 UBE2Q2Q8WVN8 375 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 SNX19Q92543 992 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 IRX2Q9BZI1 471 aaPredicted RBP15.22■□□□□ 0.03
UBXN1-218ENST00000616865 OSBPL2Q9H1P3 480 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 KCND1Q9NSA2 647 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 STIM2Q9P246 746 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 OR12D3Q9UGF7 316 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 XPO7Q9UIA9 1087 aaKnown RBP15.22■□□□□ 0.03
UBXN1-218ENST00000616865 SNX10Q9Y5X0 201 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 HS3ST4Q9Y661 456 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 SLCO1B1Q9Y6L6 691 aa15.22■□□□□ 0.03
UBXN1-218ENST00000616865 ANKRD11Q6UB99 2663 aaPredicted RBP15.22■□□□□ 0.03
UBXN1-218ENST00000616865 H3BRJ5 948 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 TIMM44O43615 452 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 CREB3O43889 395 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 C7P10643 843 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 IL1R2P27930 398 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 ACSL1P33121 698 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 GGCXP38435 758 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 ARL4AP40617 200 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 CETN2P41208 172 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 CSNK1EP49674 416 aaKnown RBP15.21■□□□□ 0.03
UBXN1-218ENST00000616865 DNA2P51530 1060 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 CDH6P55285 790 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 AUHQ13825 339 aaKnown RBP15.21■□□□□ 0.03
UBXN1-218ENST00000616865 COL28A1Q2UY09 1125 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 PIK3R6Q5UE93 754 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 RWDD4Q6NW29 188 aaKnown RBP15.21■□□□□ 0.03
UBXN1-218ENST00000616865 RFWD3Q6PCD5 774 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 PDZD3Q86UT5 571 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 NT5DC3Q86UY8 548 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 RHBDD1Q8TEB9 315 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 WFIKKN2Q8TEU8 576 aa15.21■□□□□ 0.03
UBXN1-218ENST00000616865 C1orf74Q96LT6 269 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms