RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, human

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FMR1-216	ENST00000616614	IGHV1OR15-9	A0A0B4J2B8	117 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	MCF2L	O15068	1137 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	MAP3K6	O95382	1288 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	CTSL	P07711	333 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	CDKN2B	P42772	138 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	TPMT	P51580	245 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	METAP1	P53582	386 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	GBE1	Q04446	702 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	SLC10A2	Q12908	348 aa	Predicted RBP	32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	SIM2	Q14190	667 aa	Predicted RBP	32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	LLGL1	Q15334	1064 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	INO80D	Q53TQ3	878 aa	Predicted RBP	32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	DPY19L3	Q6ZPD9	716 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	ZNF662	Q6ZS27	426 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	KBTBD6	Q86V97	674 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	PLD5	Q8N7P1	536 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	VOPP1	Q96AW1	172 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	ISG20	Q96AZ6	181 aa	Known RBP	32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	TM6SF2	Q9BZW4	377 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	LZTFL1	Q9NQ48	299 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	PPM1H	Q9ULR3	514 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	PPP2R2C	Q9Y2T4	447 aa		32.42	■■■□□ 2.78
FMR1-216	ENST00000616614	FANCM	Q8IYD8	2048 aa		32.41	■■■□□ 2.78
FMR1-216	ENST00000616614	PROB1	E7EW31	1015 aa		32.41	■■■□□ 2.78
FMR1-216	ENST00000616614	NRDC	O43847	1150 aa		32.41	■■■□□ 2.78
FMR1-216	ENST00000616614	SERPINB6	P35237	376 aa		32.41	■■■□□ 2.78
FMR1-216	ENST00000616614	PEX5	P50542	639 aa		32.41	■■■□□ 2.78
FMR1-216	ENST00000616614	DNA2	P51530	1060 aa		32.41	■■■□□ 2.78
FMR1-216	ENST00000616614	CST6	Q15828	149 aa		32.41	■■■□□ 2.78
FMR1-216	ENST00000616614	SLC9A4	Q6AI14	798 aa		32.41	■■■□□ 2.78
FMR1-216	ENST00000616614	SPOCD1	Q6ZMY3	1216 aa		32.41	■■■□□ 2.78
FMR1-216	ENST00000616614	PCDH20	Q8N6Y1	951 aa	Known RBP	32.41	■■■□□ 2.78
FMR1-216	ENST00000616614	OR8D1	Q8WZ84	308 aa		32.41	■■■□□ 2.78
FMR1-216	ENST00000616614	UBA2	Q9UBT2	640 aa	Predicted RBP	32.41	■■■□□ 2.78
FMR1-216	ENST00000616614	EML5	Q05BV3	1969 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	MID1	O15344	667 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	KRT86	O43790	486 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	MAFK	O60675	156 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	ZNF217	O75362	1048 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	FTCD	O95954	541 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	PEX11B	O96011	259 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	PTMA	P06454	111 aa	Known RBP	32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	KRT10	P13645	584 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	CTNNA2	P26232	953 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	IL10RB	Q08334	325 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	LPAL2	Q16609	132 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	CARD16	Q5EG05	197 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	ALG3	Q92685	438 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	SERGEF	Q9UGK8	458 aa		32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	PACSIN2	Q9UNF0	486 aa	Predicted RBP	32.4	■■■□□ 2.78
FMR1-216	ENST00000616614	RNASEH1	O60930	286 aa	Known RBP	32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	ZRANB2	O95218	330 aa	Known RBP eCLIP	32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	ACADM	P11310	421 aa		32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	SLC8A1	P32418	973 aa		32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	PSMD8	P48556	350 aa		32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	ZBTB16	Q05516	673 aa		32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	ADCY2	Q08462	1091 aa		32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	GALNT2	Q10471	571 aa		32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	PRR23B	Q6ZRT6	265 aa		32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	CEP68	Q76N32	757 aa		32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	RCOR2	Q8IZ40	523 aa		32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	LRRN4	Q8WUT4	740 aa		32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	CASKIN2	Q8WXE0	1202 aa		32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	PABPC3	Q9H361	631 aa	Known RBP	32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	SP110	Q9HB58	689 aa		32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	32.39	■■■□□ 2.78
FMR1-216	ENST00000616614	NUP205	Q92621	2012 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	IL1B	P01584	269 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	IGLV3-19	P01714	112 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	DNTT	P04053	509 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	CHRNA3	P32297	505 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	PLK5	Q496M5	336 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	ODF2	Q5BJF6	829 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	PEX26	Q7Z412	305 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	SYCE1	Q8N0S2	351 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	AADAT	Q8N5Z0	425 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	EXD1	Q8NHP7	514 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	DUSP15	Q9H1R2	295 aa	Predicted RBP	32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	DTL	Q9NZJ0	730 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	LHX3	Q9UBR4	397 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	AMFR	Q9UKV5	643 aa		32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	NYNRIN	Q9P2P1	1898 aa	Known RBP	32.38	■■■□□ 2.77
FMR1-216	ENST00000616614	ALOX15B	O15296	676 aa		32.37	■■■□□ 2.77
FMR1-216	ENST00000616614	GK	P32189	559 aa		32.37	■■■□□ 2.77
FMR1-216	ENST00000616614	CCNH	P51946	323 aa	Predicted RBP	32.37	■■■□□ 2.77
FMR1-216	ENST00000616614	RFX6	Q8HWS3	928 aa		32.37	■■■□□ 2.77
FMR1-216	ENST00000616614	OR6K2	Q8NGY2	324 aa		32.37	■■■□□ 2.77
FMR1-216	ENST00000616614	MAK16	Q9BXY0	300 aa	Known RBP	32.37	■■■□□ 2.77
FMR1-216	ENST00000616614	HECA	Q9UBI9	543 aa	Predicted RBP	32.37	■■■□□ 2.77
FMR1-216	ENST00000616614	WASF2	Q9Y6W5	498 aa		32.37	■■■□□ 2.77
FMR1-216	ENST00000616614	CCDC66	A2RUB6	948 aa		32.36	■■■□□ 2.77
FMR1-216	ENST00000616614	BYSL	Q13895	437 aa	Known RBP	32.36	■■■□□ 2.77
FMR1-216	ENST00000616614	POM121L1P	Q3SYA9	428 aa		32.36	■■■□□ 2.77
FMR1-216	ENST00000616614	NPNT	Q6UXI9	565 aa		32.36	■■■□□ 2.77
FMR1-216	ENST00000616614	FAM124A	Q86V42	546 aa		32.36	■■■□□ 2.77
FMR1-216	ENST00000616614	PLPP6	Q8IY26	295 aa		32.36	■■■□□ 2.77
FMR1-216	ENST00000616614	ATPAF2	Q8N5M1	289 aa		32.36	■■■□□ 2.77
FMR1-216	ENST00000616614	OR2AP1	Q8NGE2	309 aa		32.36	■■■□□ 2.77
FMR1-216	ENST00000616614	PIP4K2C	Q8TBX8	421 aa		32.36	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms