RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.74□□□□□ -0.213e-9■■■■□ 20.3
PPP4R3B-205ENST00000616288 MSH4O15457 936 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 TBXAS1P24557 533 aaPredicted RBP13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 FMO4P31512 558 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 GDF10P55107 478 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 KCNK10P57789 538 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 CYP20A1Q6UW02 462 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 ABHD11Q8NFV4 315 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 CYP2W1Q8TAV3 490 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 PIK3R3Q92569 461 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 KREMEN1Q96MU8 473 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 SEPT9Q9UHD8 586 aaPredicted RBP13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 CNOT6Q9ULM6 557 aaKnown RBP13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 TBX22Q9Y458 520 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 ITSN1Q15811 1721 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 hCG_1818297A0A087WSY0 165 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 M0QYV0 167 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 RNF103O00237 685 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 GAS2O43903 313 aaKnown RBP13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 CD83Q01151 205 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 DLGAP5Q15398 846 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 FAM214AQ32MH5 1076 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 TTC23Q5W5X9 447 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 SYCE2Q6PIF2 218 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 RAB43Q86YS6 212 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 RMND5AQ9H871 391 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 TBC1D13Q9NVG8 400 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 LOC110117498-PIK3R3F6TDL0 507 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 DFFAO00273 331 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 SYNCRIPO60506 623 aaKnown RBP13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 RFPL2O75678 378 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 RSL1D1O76021 490 aaKnown RBP13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 RBL1P28749 1068 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 HTR2BP41595 481 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 GRIA4P48058 902 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 SCNN1DP51172 638 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 HNRNPFP52597 415 aaKnown RBP13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 HADHBP55084 474 aaKnown RBP13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 TMEM236Q5W0B7 351 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 BRSK2Q8IWQ3 736 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 CADM2Q8N3J6 435 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 OR2T34Q8NGX1 318 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 OR2T3Q8NH03 318 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 ASZ1Q8WWH4 475 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 SHC3Q92529 594 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 FAM162AQ96A26 154 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 PHF21BQ96EK2 531 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 CHST12Q9NRB3 414 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 CCDC59Q9P031 241 aaKnown RBP13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 TMEM9Q9P0T7 183 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 PCDHGA10Q9Y5H3 936 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 SNRPB2P08579 225 aaKnown RBP13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 ZNF37AP17032 561 aaPredicted RBP13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 SDC4P31431 198 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 CAPGP40121 348 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 ZNF543Q08ER8 600 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 PPP1R3AQ16821 1122 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 SPESP1Q6UW49 350 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 FKBP9P1Q75LS8 142 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 KDELC2Q7Z4H8 507 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 THNSL1Q8IYQ7 743 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 APOL2Q9BQE5 337 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 FKBP14Q9NWM8 211 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 RBAKQ9NYW8 714 aaPredicted RBP13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 NCKIPSDQ9NZQ3 722 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 KLHL3Q9UH77 587 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 OGDHLQ9ULD0 1010 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 SNCAIPQ9Y6H5 919 aa13.73□□□□□ -0.21
PPP4R3B-205ENST00000616288 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 TMX2-CTNND1H3BSU7 103 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 DYRK3O43781 588 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 TGM2P21980 687 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 GPD2P43304 727 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 HK2P52789 917 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 MAPK12P53778 367 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 PLEKHG7Q6ZR37 379 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 KIAA0408Q6ZU52 694 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 SLC29A1Q99808 456 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 RIBC2Q9H4K1 309 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 ELOVL6Q9H5J4 265 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 DHX33Q9H6R0 707 aaKnown RBP13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 RUBCNLQ9H714 662 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 USE1Q9NZ43 259 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 BOLA1Q9Y3E2 137 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 SLC30A1Q9Y6M5 507 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 CAPN14A8MX76 684 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 CXorf49A8MYA2 514 aaPredicted RBP13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 F5H6K3 240 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 NDUFS2O75306 463 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 RHOBTB1O94844 696 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 KLRC2P26717 231 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 GP5P40197 560 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 PRKCQQ04759 706 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 ARHGEF6Q15052 776 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 TRMT10BQ6PF06 316 aaKnown RBP13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 ABRAQ8N0Z2 381 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 ELMO2Q96JJ3 720 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 CLEC4MQ9H2X3 399 aaPredicted RBP13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 ZNF358Q9NW07 568 aa13.72□□□□□ -0.21
PPP4R3B-205ENST00000616288 C9JVG2 144 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms