RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ZMYND8Q9ULU4 1186 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MSI1O43347 362 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SIN3BO75182 1162 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 EEF1B2P24534 225 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 RPL9P32969 192 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 GRIA4P48058 902 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 NSUN2Q08J23 767 aaKnown RBP eCLIP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TIGD5Q53EQ6 642 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 LDLRAD1Q5T700 205 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SDHAF4Q5VUM1 108 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SPRYD7Q5W111 196 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TRNP1Q6NT89 227 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 KIAA0408Q6ZU52 694 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 FAM228AQ86W67 206 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SPATA6LQ8N4H0 392 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 UBR7Q8N806 425 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ATP6V0D2Q8N8Y2 350 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 PCSK9Q8NBP7 692 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 WDR60Q8WVS4 1066 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ASIC4Q96FT7 647 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 FAR2Q96K12 515 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SLC25A23Q9BV35 468 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 FTHL17Q9BXU8 183 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SYTL2Q9HCH5 934 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TMPRSS4Q9NRS4 437 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 GDAP2Q9NXN4 497 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MOCS1Q9NZB8 636 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 VWA7Q9Y334 891 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ARHGAP10A1A4S6 786 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 CCDC85CA6NKD9 419 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 PSMD12O00232 456 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 T-ENOLP0DO92 83 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 KCNE1P15382 129 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 OR1E1P30953 314 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 PPARGP37231 505 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 FLT3LGP49771 235 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 FKBP1BP68106 108 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 VEPH1Q14D04 833 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ESRP1Q6NXG1 681 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TAPT1Q6NXT6 567 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 OTOP3Q7RTS5 596 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 HPS6Q86YV9 775 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 FSTL5Q8N475 847 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MAB21L3Q8N8X9 362 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TMEM40Q8WWA1 233 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MYLPFQ96A32 169 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 CATSPER2Q96P56 530 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 CRYL1Q9Y2S2 319 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 CACNA1IQ9P0X4 2223 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 MRASO14807 208 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 AKAP10O43572 662 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 KPNA6O60684 536 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 RHOBTB1O94844 696 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 TKTP29401 623 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 DSG1Q02413 1049 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 BTKQ06187 659 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ELAVL2Q12926 359 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 NCBP2-AS2Q69YL0 99 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 PDZD8Q8NEN9 1154 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 HDAC10Q969S8 669 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 FBXO44Q9H4M3 255 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 STN1Q9H668 368 aaKnown RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 ABCC13Q9NSE7 274 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 SMPD4Q9NXE4 827 aa5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 UXTQ9UBK9 157 aaPredicted RBP5.72□□□□□ -1.49
SYNCRIP-204ENST00000616122 CCL22O00626 93 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 IL10P22301 178 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 YWHAQP27348 245 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 CLCNKBP51801 687 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 AIF1P55008 147 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 SLC10A2Q12908 348 aaPredicted RBP5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 TSTA3Q13630 321 aaPredicted RBP5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 LAMB3Q13751 1172 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 FAM171A1Q5VUB5 890 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 TMEM198Q66K66 360 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 DCLRE1AQ6PJP8 1040 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 TP53INP2Q8IXH6 220 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 NUP93Q8N1F7 819 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 CATSPER1Q8NEC5 780 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 RCN3Q96D15 328 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 TMEM169Q96HH4 297 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 PRPF18Q99633 342 aaKnown RBP5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 PRKAG3Q9UGI9 489 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 PCDHB5Q9Y5E4 795 aa5.71□□□□□ -1.49
SYNCRIP-204ENST00000616122 FAM189A1O60320 539 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 USP1O94782 785 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 OR4Q2P0C623 313 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 COX4I1P13073 169 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 CYP3A5P20815 502 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 CRABP2P29373 138 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 SERPINH1P50454 418 aaKnown RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 RABGGTBP53611 331 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 CDK18Q07002 472 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 TMEM259Q4ZIN3 620 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 BRMS1LQ5PSV4 323 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAM117BQ6P1L5 589 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 PKN3Q6P5Z2 889 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 CYP2R1Q6VVX0 501 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 CYS1Q717R9 158 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 ASRGL1Q7L266 308 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms