RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 FAM126AQ9BYI3 521 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 GMEB2Q9UKD1 530 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 PNMA8BQ9ULN7 279 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 MYO6Q9UM54 1294 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 DFFAO00273 331 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 F9P00740 461 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 CYP1A2P05177 515 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 MYF5P13349 255 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 PAPOLAP51003 745 aaKnown RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 CLDN2P57739 230 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 STARD3Q14849 445 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 EIF4HQ15056 248 aaKnown RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 ZNF542PQ5EBM4 170 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 TPRG1LQ5T0D9 272 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 LAIR1Q6GTX8 287 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 ARCQ7LC44 396 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 PGBD5Q8N414 524 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 PIP4K2CQ8TBX8 421 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 UCMAQ8WVF2 138 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 SLC6A18Q96N87 628 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 ZDHHC6Q9H6R6 413 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 CTTNBP2NLQ9P2B4 639 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 EVLQ9UI08 416 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 PACSIN2Q9UNF0 486 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 A0A1B0GVT2 93 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 TYW5A2RUC4 315 aaKnown RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 RASA4BC9J798 803 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 KPNA3O00505 521 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 RASA4O43374 803 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 AKR1B10O60218 316 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 BUB1BO60566 1050 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 EPN2O95208 641 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 ENGP17813 658 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 CCNHP51946 323 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 POLD3Q15054 466 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 CYTH1Q15438 398 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 ERMARDQ5T6L9 678 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 AGBL4Q5VU57 503 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 C22orf39Q6P5X5 142 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 LRRC31Q6UY01 552 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 RFX8Q6ZV50 586 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 PNPLA1Q8N8W4 532 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 TBC1D31Q96DN5 1066 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 NUP58Q9BVL2 599 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 ACE2Q9BYF1 805 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 LRRC19Q9H756 370 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 TMEM248Q9NWD8 314 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 RAB23Q9ULC3 237 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 PPM1HQ9ULR3 514 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 COQ6Q9Y2Z9 468 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 USP24Q9UPU5 2620 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 ZFYVE26Q68DK2 2539 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 AKR1B15C9JRZ8 316 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 EEF2KO00418 725 aaKnown RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 RAD51BO15315 384 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 ALDH1A2O94788 518 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 ACADMP11310 421 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 PLK1P53350 603 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 ADPRHP54922 357 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 TPI1P60174 286 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 GBE1Q04446 702 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 SLC10A7Q0GE19 358 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 SCAPQ12770 1279 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 EFHC2Q5JST6 749 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 LYSMD4Q5XG99 296 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 POLNQ7Z5Q5 900 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 RTL3Q8N8U3 475 aaKnown RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 BRD8Q9H0E9 1235 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 OSBPL2Q9H1P3 480 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 PCDH18Q9HCL0 1135 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 ZFR2Q9UPR6 939 aaKnown RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 HS3ST2Q9Y278 367 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 BTBD3Q9Y2F9 522 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 KNTC1P50748 2209 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 CCDC163A0A0D9SF12 145 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 KRIT1O00522 736 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 SLC31A1O15431 190 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 ATP9BO43861 1147 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 RAMP2O60895 175 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 TMCC1O94876 653 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 UGT2B4P06133 528 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 KRT10P13645 584 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 ABL2P42684 1182 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 SERPINH1P50454 418 aaKnown RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 ST8SIA6P61647 398 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 DPYSQ14117 519 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 PIP5KL1Q5T9C9 394 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 SARM1Q6SZW1 724 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 LPCAT2Q7L5N7 544 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 CYP2U1Q7Z449 544 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 RYBPQ8N488 228 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 MSANTD4Q8NCY6 345 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 PCDH19Q8TAB3 1148 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 KRT35Q92764 455 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 SYN2Q92777 582 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 CSPG4P5Q96PW8 444 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 DEF6Q9H4E7 631 aa5.81□□□□□ -1.48
CPNE3-208ENST00000614678 FNDC3AQ9Y2H6 1198 aaKnown RBP5.81□□□□□ -1.48
CPNE3-208ENST00000614678 MFSD11O43934 449 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms