RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 RSAD1Q9HA92 442 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 SMYD2Q9NRG4 433 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 DCDC2Q9UHG0 476 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 TRIP11Q15643 1979 aa22.3■■□□□ 1.16
POLR2J3-220ENST00000613744 BOLA2-SMG1P6H3BVE0 249 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 ZNF623O75123 536 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 VNN1O95497 513 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 CSH1P0DML2 217 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 CSH2P0DML3 217 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 PSMA2P25787 234 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 HMOX2P30519 316 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 GATMP50440 423 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 CDKL1Q00532 357 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 MTM1Q13496 603 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 TRPC3Q13507 836 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 TMEM240Q5SV17 173 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 JADE1Q6IE81 842 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 BNC2Q6ZN30 1099 aaPredicted RBP22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 MRPL10Q7Z7H8 261 aaKnown RBP22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 ZNF598Q86UK7 904 aaKnown RBP22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 WDR49Q8IV35 697 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 CMASQ8NFW8 434 aaPredicted RBP22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 RIN3Q8TB24 985 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 APOBEC3GQ9HC16 384 aaKnown RBP22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 CXXC1Q9P0U4 656 aaPredicted RBP22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 PCDHB7Q9Y5E2 793 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 HMX2A2RU54 273 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 PLIN3O60664 434 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 LYPLA1O75608 230 aaPredicted RBP22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 IL18RAPO95256 599 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 PFKMP08237 780 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 NCF2P19878 526 aaPredicted RBP22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 FAM189BP81408 668 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 SCARA3Q6AZY7 606 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 DARS2Q6PI48 645 aaKnown RBP22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 TAB3Q8N5C8 712 aaPredicted RBP22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 SPATA18Q8TC71 538 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 STON2Q8WXE9 905 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 CNDP1Q96KN2 507 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 ZMAT2Q96NC0 199 aaKnown RBP22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 RANBP9Q96S59 729 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 PLAC1Q9HBJ0 212 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 PNPLA3Q9NST1 481 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 LRFN2Q9ULH4 789 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 MYRFQ9Y2G1 1151 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 CDY1Q9Y6F8 540 aa22.29■■□□□ 1.16
POLR2J3-220ENST00000613744 CITO14578 2027 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 ABHD14A-ACY1A0A1B0GW23 586 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 H3BNH8 94 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 LRCH4O75427 683 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 ADSLP30566 484 aaPredicted RBP22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 ABCE1P61221 599 aaKnown RBP22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 WDR5P61964 334 aaKnown RBP22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 GK3PQ14409 553 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 ACAP1Q15027 740 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 SURF1Q15526 300 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 ZNF423Q2M1K9 1284 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 PIGGQ5H8A4 983 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 C16orf46Q6P387 395 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 SNX27Q96L92 541 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 ZNF597Q96LX8 424 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 BRD8Q9H0E9 1235 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 MIOSQ9NXC5 875 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 TDRKHQ9Y2W6 561 aaKnown RBP22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 FADS3Q9Y5Q0 445 aa22.28■■□□□ 1.16
POLR2J3-220ENST00000613744 CCDC162PA2VCL2 907 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 ARL5CA6NH57 179 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 DUOXA2Q1HG44 320 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 SPOPLQ6IQ16 392 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 EPGNQ6UW88 154 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 HACE1Q8IYU2 909 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 KYQ8NBH2 561 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 PGBD4Q96DM1 585 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 COPS7BQ9H9Q2 264 aaPredicted RBP22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 PALMDQ9NP74 551 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 EMCNQ9ULC0 261 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 PCDHGC3Q9UN70 934 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 LOC100653049A0A140TA62 436 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 TMEM247A6NEH6 219 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 TRIM64CA6NLI5 447 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 KRT34O76011 436 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 POLR2BP30876 1174 aaKnown RBP22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 ENTPD1P49961 510 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 RPL10AP62906 217 aaKnown RBP22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 MRPS22P82650 360 aaKnown RBP22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 C16orf72Q14CZ0 275 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 PCLAFQ15004 111 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 CLLU1OSQ5K130 101 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 UNC5AQ6ZN44 842 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 CARM1Q86X55 608 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 LILRA2Q8N149 483 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 PHTF2Q8N3S3 785 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 TMEM102Q8N9M5 508 aaPredicted RBP22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 KIF12Q96FN5 646 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 CORO1BQ9BR76 489 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 YIPF2Q9BWQ6 316 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 TMEM161AQ9NX61 479 aa22.27■■□□□ 1.16
POLR2J3-220ENST00000613744 TTC3P53804 2025 aa22.27■■□□□ 1.15
POLR2J3-220ENST00000613744 ANK1P16157 1881 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 DCXO43602 365 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms