RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 LRP8Q14114 963 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 NR1D2Q14995 579 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 MFSD2AQ8NA29 543 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 TNIP2Q8NFZ5 429 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 HTR3CQ8WXA8 447 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 STON2Q8WXE9 905 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 ACDQ96AP0 544 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 TMEM176AQ96HP8 235 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 MPHOSPH6Q99547 160 aaKnown RBP16.83■□□□□ 0.28
TSKU-205ENST00000612930 DTLQ9NZJ0 730 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 NCKIPSDQ9NZQ3 722 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 VTI1BQ9UEU0 232 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 CD300AQ9UGN4 299 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 ZNF839A8K0R7 811 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 TMEM233B4DJY2 109 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 MDM4O15151 490 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 HDCP19113 662 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 TFE3P19532 575 aaPredicted RBP16.83■□□□□ 0.28
TSKU-205ENST00000612930 OLIG2Q13516 323 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 ZNF667Q5HYK9 610 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 ZYG11AQ6WRX3 759 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 ZPBP2Q6X784 338 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 TBCBQ99426 244 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 NAT9Q9BTE0 207 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 ADI1Q9BV57 179 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 IL22Q9GZX6 179 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 POLR1BQ9H9Y6 1135 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 PALMDQ9NP74 551 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 ERGIC3Q9Y282 383 aa16.83■□□□□ 0.28
TSKU-205ENST00000612930 NRP1O14786 923 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 OGTO15294 1046 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 MSCO60682 206 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 ZNF182P17025 639 aaPredicted RBP16.82■□□□□ 0.28
TSKU-205ENST00000612930 PGGT1BP53609 377 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 NME5P56597 212 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 RPS3AP61247 264 aaKnown RBP16.82■□□□□ 0.28
TSKU-205ENST00000612930 BAATQ14032 418 aaPredicted RBP16.82■□□□□ 0.28
TSKU-205ENST00000612930 EPHX4Q8IUS5 362 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 CBR4Q8N4T8 237 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 CANT1Q8WVQ1 401 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 TCF12Q99081 682 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 LGMNQ99538 433 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 CEP41Q9BYV8 373 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 GMPR2Q9P2T1 348 aaKnown RBP16.82■□□□□ 0.28
TSKU-205ENST00000612930 SIX4Q9UIU6 781 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 SARDHQ9UL12 918 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 DPYSL4O14531 572 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 CILPO75339 1184 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 CLIC3O95833 236 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 SUPT20HL2P0C7V6 817 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 RGS21Q2M5E4 152 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 SUPT20HL1Q3ZLR7 823 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 SPANXN3Q5MJ09 141 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 NETO2Q8NC67 525 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 TRUB1Q8WWH5 349 aaKnown RBP16.82■□□□□ 0.28
TSKU-205ENST00000612930 KHSRPQ92945 711 aaKnown RBP eCLIP16.82■□□□□ 0.28
TSKU-205ENST00000612930 GBA2Q9HCG7 927 aaPredicted RBP16.82■□□□□ 0.28
TSKU-205ENST00000612930 MRPL40Q9NQ50 206 aaKnown RBP16.82■□□□□ 0.28
TSKU-205ENST00000612930 CACNA2D2Q9NY47 1150 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 FZD1Q9UP38 647 aa16.82■□□□□ 0.28
TSKU-205ENST00000612930 TRIP11Q15643 1979 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 UBR3Q6ZT12 1888 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 MAFGO15525 162 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 SNAP91O60641 907 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 TNNC2P02585 160 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 ARSAP15289 507 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 TTKP33981 857 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 NR2C2P49116 596 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 ATXN1P54253 815 aaKnown RBP16.81■□□□□ 0.28
TSKU-205ENST00000612930 OSTNP61366 133 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 GNA12Q03113 381 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 TNK2Q07912 1038 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 MERTKQ12866 999 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 NME3Q13232 169 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 CCDC80Q76M96 950 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 ERMP1Q7Z2K6 904 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 TRIM50Q86XT4 487 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 ZC3H7AQ8IWR0 971 aaKnown RBP16.81■□□□□ 0.28
TSKU-205ENST00000612930 KDM1BQ8NB78 822 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 PBXIP1Q96AQ6 731 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 HEXIM2Q96MH2 286 aaKnown RBP16.81■□□□□ 0.28
TSKU-205ENST00000612930 EFHD1Q9BUP0 239 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 EIF2B3Q9NR50 452 aaKnown RBP16.81■□□□□ 0.28
TSKU-205ENST00000612930 HESX1Q9UBX0 185 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 SLCO1B7G3V0H7 640 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 SDHDO14521 159 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 RGS7P49802 495 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 TRAF2Q12933 501 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 NFATC3Q12968 1075 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 SLC36A3Q495N2 470 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 NCBP2-AS2Q69YL0 99 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 REP15Q6BDI9 236 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 SIX6OS1Q8N1H7 587 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 PELI3Q8N2H9 469 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 ERLEC1Q96DZ1 483 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 MAELQ96JY0 434 aaKnown RBP16.81■□□□□ 0.28
TSKU-205ENST00000612930 TDRD1Q9BXT4 1180 aaKnown RBP16.81■□□□□ 0.28
TSKU-205ENST00000612930 TASP1Q9H6P5 420 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 TRPC7Q9HCX4 862 aa16.81■□□□□ 0.28
TSKU-205ENST00000612930 GID8Q9NWU2 228 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms