RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 MECRQ9BV79 373 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 UBE2OQ9C0C9 1292 aaKnown RBP12.14□□□□□ -0.47
USP6NL-206ENST00000609853 RHOJQ9H4E5 214 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 UBP1Q9NZI7 540 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 MPP6Q9NZW5 540 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 NUDT5Q9UKK9 219 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 SORCS3Q9UPU3 1222 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 HBS1LQ9Y450 684 aaKnown RBP12.14□□□□□ -0.47
USP6NL-206ENST00000609853 SIN3BO75182 1162 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 HLA-DQB2P05538 268 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 GALTP07902 379 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 T-ENOLP0DO92 83 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 COL6A2P12110 1019 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 NMBRP28336 390 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 MAPKAPK2P49137 400 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 GPR15P49685 360 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 PRKAA2P54646 552 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 TAF10Q12962 218 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 CTC1Q2NKJ3 1217 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 MGAT5BQ3V5L5 792 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 C10orf120Q5SQS8 335 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 MARC1Q5VT66 337 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 SDHAF4Q5VUM1 108 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 DENND5AQ6IQ26 1287 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 CLEC14AQ86T13 490 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 LRRC43Q8N309 656 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 TEX26Q8N6G2 289 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 IPMKQ8NFU5 416 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 SPATA22Q8NHS9 363 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 RDH11Q8TC12 318 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 PPP4R1Q8TF05 950 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 OVCA2Q8WZ82 227 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 IMP4Q96G21 291 aaKnown RBP12.14□□□□□ -0.47
USP6NL-206ENST00000609853 VPS39Q96JC1 886 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 RANBP9Q96S59 729 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 GPR22Q99680 433 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 APOL2Q9BQE5 337 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 FICDQ9BVA6 458 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 TTLL2Q9BWV7 592 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 NOL6Q9H6R4 1146 aaKnown RBP12.14□□□□□ -0.47
USP6NL-206ENST00000609853 IARS2Q9NSE4 1012 aaKnown RBP12.14□□□□□ -0.47
USP6NL-206ENST00000609853 NDFIP2Q9NV92 336 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 SLC17A6Q9P2U8 582 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 COPG2Q9UBF2 871 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 TCAF1Q9Y4C2 921 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 MIA3Q5JRA6 1907 aa12.14□□□□□ -0.47
USP6NL-206ENST00000609853 HTTP42858 3142 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 A0A096LPK6 155 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 HGSO14964 777 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-206ENST00000609853 WFS1O76024 890 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 PEX11BO96011 259 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 MT-CYBP00156 380 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-206ENST00000609853 CXCL10P02778 98 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 KRT16P08779 473 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 FGF3P11487 239 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-206ENST00000609853 CPA3P15088 417 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 TPH1P17752 444 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 CALB2P22676 271 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 TARSP26639 723 aaKnown RBP12.13□□□□□ -0.47
USP6NL-206ENST00000609853 SERPINB3P29508 390 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 TUFMP49411 452 aaKnown RBP12.13□□□□□ -0.47
USP6NL-206ENST00000609853 IL10RBQ08334 325 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 LAMB3Q13751 1172 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 BTG3Q14201 252 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-206ENST00000609853 PCLAFQ15004 111 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 KIAA0930Q6ICG6 404 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-206ENST00000609853 KIAA0408Q6ZU52 694 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 ARID3BQ8IVW6 561 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-206ENST00000609853 PDZD8Q8NEN9 1154 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 PIWIL2Q8TC59 973 aaKnown RBP12.13□□□□□ -0.47
USP6NL-206ENST00000609853 NSL1Q96IY1 281 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 TSNARE1Q96NA8 513 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 AGAP2Q99490 1192 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 SEPT5Q99719 369 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-206ENST00000609853 FAM167BQ9BTA0 163 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 TLE6Q9H808 572 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 HSFX1Q9UBD0 423 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 HAO1Q9UJM8 370 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 TANC1Q9C0D5 1861 aa12.13□□□□□ -0.47
USP6NL-206ENST00000609853 SLC12A8A0AV02 714 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 HEATR9A2RTY3 570 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 PAPSS2O95340 614 aaPredicted RBP12.12□□□□□ -0.47
USP6NL-206ENST00000609853 MYL4P12829 197 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 SLC1A6P48664 564 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 CSRP3P50461 194 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 MNAT1P51948 309 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 ARPP19P56211 112 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 PSMD5Q16401 504 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 C5orf22Q49AR2 442 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 SNX30Q5VWJ9 437 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 SLC8B1Q6J4K2 584 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 FBXL22Q6P050 247 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 KDELC1Q6UW63 502 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 RNF19BQ6ZMZ0 732 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 ZC3HC1Q86WB0 502 aaKnown RBP12.12□□□□□ -0.47
USP6NL-206ENST00000609853 CALML6Q8TD86 181 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 SLC7A6OSQ96CW6 309 aaPredicted RBP12.12□□□□□ -0.47
USP6NL-206ENST00000609853 MRGPRX2Q96LB1 330 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 ZNF599Q96NL3 588 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 SP110Q9HB58 689 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms