RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 WIPF2Q8TF74 440 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 HSPH1Q92598 858 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 SKA1Q96BD8 255 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 TEFMQ96QE5 360 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 TTYH1Q9H313 450 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 HIPK3Q9H422 1215 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 AAMDCQ9H7C9 122 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 ACTR5Q9H9F9 607 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 VEZTQ9HBM0 779 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 SMC4Q9NTJ3 1288 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 CNPY2Q9Y2B0 182 aa4.62□□□□□ -1.67
SMCHD1-213ENST00000609587 KIR2DS5A0A0G2JLQ3 304 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 TARSL2A2RTX5 802 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 GAGE10A6NGK3 116 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 FOXO6A8MYZ6 492 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 B4E171 279 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 KIR2DS3K7RE56 304 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 CEP104O60308 925 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 DDAH2O95865 285 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 IL1AP01583 271 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 TSPAN7P41732 249 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 CCT4P50991 539 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 FBXO43Q4G163 708 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 ZNF766Q5HY98 468 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 C11orf87Q6NUJ2 197 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 AAGABQ6PD74 315 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 SLC2A7Q6PXP3 512 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 B4GALNT4Q76KP1 1039 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 ARMC8Q8IUR7 673 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 DNAAF1Q8NEP3 725 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 SPATA3Q8NHX4 192 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 FAR1Q8WVX9 515 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 IGFBPL1Q8WX77 278 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 RFFLQ8WZ73 363 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 RPL36ALQ969Q0 106 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 KIF1BPQ96EK5 621 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 ZNF419Q96HQ0 510 aaPredicted RBP4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 SLC32A1Q9H598 525 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 TMEM184CQ9NVA4 438 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 PPP1R14DQ9NXH3 145 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 IL1RAPL1Q9NZN1 696 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 HCN3Q9P1Z3 774 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 NLKQ9UBE8 527 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 SLC25A10Q9UBX3 287 aaPredicted RBP4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 FBXO40Q9UH90 709 aa4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 AGO2Q9UKV8 859 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-213ENST00000609587 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 TRBV5-3A0A0A0MS03 114 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 TEX22C9J3V5 150 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 E5RJQ4 531 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 ADAM10O14672 748 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 SPTLC2O15270 562 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 TBX18O95935 607 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 F9P00740 461 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 ADAP00813 363 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 SERPINC1P01008 464 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 URODP06132 367 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 IGKV2-30P06310 120 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 HOXD9P28356 352 aaPredicted RBP4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 SLC16A2P36021 539 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 GEMIN4P57678 1058 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 TRIP6Q15654 476 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 RPE65Q16518 533 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 DEF8Q6ZN54 512 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 H1FNTQ75WM6 255 aaPredicted RBP4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 WDR5BQ86VZ2 330 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 ANKRD13BQ86YJ7 626 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 CPXM2Q8N436 756 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 PRSS3P2Q8NHM4 247 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 HDAC7Q8WUI4 952 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 HDAC2Q92769 488 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 EME1Q96AY2 570 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 MPHOSPH8Q99549 860 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 CXorf56Q9H5V9 222 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 SEMA4BQ9NPR2 832 aaPredicted RBP4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 ENTPD7Q9NQZ7 604 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 ATP8A2Q9NTI2 1148 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 GRHL1Q9NZI5 618 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 CAMK2AQ9UQM7 478 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 CLDN16Q9Y5I7 305 aa4.6□□□□□ -1.67
SMCHD1-213ENST00000609587 C17orf113A0A1B0GUU1 675 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 TLR2O60603 784 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 TMCC1O94876 653 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 RTN3O95197 1032 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 EFNB1P98172 346 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 MST1RQ04912 1400 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 KLF9Q13886 244 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 MAPRE1Q15691 268 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 SMTNL2Q2TAL5 461 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 PRICKLE4Q2TBC4 344 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 ENTPD8Q5MY95 495 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 C6orf10Q5SRN2 563 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 FAM180BQ6P0A1 224 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 C17orf99Q6UX52 265 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 IL20RBQ6UXL0 311 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 DSTYKQ6XUX3 929 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 FAM185AQ8N0U4 392 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 SLC25A41Q8N5S1 370 aa4.59□□□□□ -1.67
SMCHD1-213ENST00000609587 DPP10Q8N608 796 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms