RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 AFMIDQ63HM1 303 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 LINGO4Q6UY18 593 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 VSIG1Q86XK7 387 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 LRRC49Q8IUZ0 686 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 DNASE2BQ8WZ79 361 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 HSPH1Q92598 858 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 GPR174Q9BXC1 333 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 OSGEPQ9NPF4 335 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 PILRBQ9UKJ0 227 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 EPN1Q9Y6I3 576 aaPredicted RBP14.56□□□□□ -0.08
HDDC2-209ENST00000609477 GPR179Q6PRD1 2367 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 PTPRZ1P23471 2315 aaPredicted RBP14.55□□□□□ -0.08
HDDC2-209ENST00000609477 GVINP1Q7Z2Y8 2422 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 A0A0A6YYK5 440 aaPredicted RBP14.55□□□□□ -0.08
HDDC2-209ENST00000609477 LRRC72A6NJI9 287 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 K7ERQ8 282 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 BUB1O43683 1085 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 ZNF821O75541 412 aaPredicted RBP14.55□□□□□ -0.08
HDDC2-209ENST00000609477 RNASEH2AO75792 299 aaKnown RBP14.55□□□□□ -0.08
HDDC2-209ENST00000609477 NDUFA10O95299 355 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 SEMA4FO95754 770 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 GSRP00390 522 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 VAV1P15498 845 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 GNSP15586 552 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 CHRNA3P32297 505 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 SSR1P43307 286 aaKnown RBP14.55□□□□□ -0.08
HDDC2-209ENST00000609477 SNRPD1P62314 119 aaKnown RBP14.55□□□□□ -0.08
HDDC2-209ENST00000609477 DUOXA1Q1HG43 343 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 SMTNL2Q2TAL5 461 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 TMCO4Q5TGY1 634 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 LRRC38Q5VT99 294 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 DAB2IPQ5VWQ8 1189 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 SLC23A3Q6PIS1 610 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 TMCO3Q6UWJ1 677 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 PRR23CQ6ZRP0 262 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 ZNF354CQ86Y25 554 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 SLC41A1Q8IVJ1 513 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 KIAA2013Q8IYS2 634 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 TXLNBQ8N3L3 684 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 C12orf50Q8NA57 414 aaPredicted RBP14.55□□□□□ -0.08
HDDC2-209ENST00000609477 GANCQ8TET4 914 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 TSC1Q92574 1164 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 HMCESQ96FZ2 354 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 PPP1R16AQ96I34 528 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 HSPA12BQ96MM6 686 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 CSPG4P5Q96PW8 444 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 KLC2Q9H0B6 622 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 PCDH18Q9HCL0 1135 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 PARD6AQ9NPB6 346 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 CD93Q9NPY3 652 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 IL36AQ9UHA7 158 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 PCDHA13Q9Y5I0 950 aa14.55□□□□□ -0.08
HDDC2-209ENST00000609477 A0A1W2PP55 124 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 ZNF487B1APH4 448 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 KHNYNO15037 678 aaKnown RBP14.54□□□□□ -0.08
HDDC2-209ENST00000609477 POP4O95707 220 aaKnown RBP14.54□□□□□ -0.08
HDDC2-209ENST00000609477 TCF4P15884 667 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 ACSL1P33121 698 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 PSMD8P48556 350 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 NUMBP49757 651 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 ARSEP51690 589 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 CDH6P55285 790 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 RAD51Q06609 339 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 KRT81Q14533 505 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 MESDQ14696 234 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 RFTN1Q14699 578 aaPredicted RBP14.54□□□□□ -0.08
HDDC2-209ENST00000609477 GRM3Q14832 879 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 DPY19L3Q6ZPD9 716 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 CACUL1Q86Y37 369 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 HDDC3Q8N4P3 179 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 AADATQ8N5Z0 425 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 KCTD6Q8NC69 237 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 OR2AP1Q8NGE2 309 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 OR2T34Q8NGX1 318 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 PIP4K2CQ8TBX8 421 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 PIGKQ92643 395 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 BAG1Q99933 345 aaPredicted RBP14.54□□□□□ -0.08
HDDC2-209ENST00000609477 HEPHQ9BQS7 1158 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 ZNF670Q9BS34 389 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 NEUROG2Q9H2A3 272 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 DYRK4Q9NR20 520 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 CFAP54Q96N23 3096 aa14.54□□□□□ -0.08
HDDC2-209ENST00000609477 MEI4A8MW99 385 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 BNIP3LO60238 219 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 PRAMEF11O60813 436 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 SERPINF2P08697 491 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 ITPKAP23677 461 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 IL4RP24394 825 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 DRD3P35462 400 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 NUDT1P36639 197 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 PAPOLAP51003 745 aaKnown RBP14.53□□□□□ -0.08
HDDC2-209ENST00000609477 LIMK1P53667 647 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 GSDMDP57764 484 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 IL10RBQ08334 325 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 DCAF12L1Q5VU92 463 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 TXNRD3NBQ6F5E7 133 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 NEK5Q6P3R8 708 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 FAM124AQ86V42 546 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 RGL4Q8IZJ4 473 aa14.53□□□□□ -0.08
HDDC2-209ENST00000609477 ZNF599Q96NL3 588 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms