RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 EDEM3Q9BZQ6 932 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 GAREM1Q9H706 876 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 PARVAQ9NVD7 372 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 PCSK1NQ9UHG2 260 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 WASF2Q9Y6W5 498 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 CACNA1AO00555 2505 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 TBC1D3DA0A087WVF3 549 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 TBC1D3IA0A087WXS9 549 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 TBC1D3EA0A087X179 549 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 TBC1D3KA0A087X1G2 549 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 TBC1D3FA6NER0 549 aaPredicted RBP12.54□□□□□ -0.4
CTSA-210ENST00000606000 TMEM191CA6NGB0 347 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 TBC1D3LB9A6J9 549 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 KPNA3O00505 521 aaPredicted RBP12.54□□□□□ -0.4
CTSA-210ENST00000606000 SH3BP5O60239 455 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 RAMP2O60895 175 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 LEFTY1O75610 366 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 TBC1D3HP0C7X1 549 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 TCF4P15884 667 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 SPINK2P20155 84 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 PMLP29590 882 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 GRIA4P48058 902 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 DNA2P51530 1060 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 CLCN6P51797 869 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 CCNHP51946 323 aaPredicted RBP12.54□□□□□ -0.4
CTSA-210ENST00000606000 IL9RQ01113 521 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 FOXC1Q12948 553 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 ARSIQ5FYB1 569 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 PRAMEF14Q5SWL7 426 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 FAM46CQ5VWP2 391 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 TBC1D3GQ6DHY5 549 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 TBC1D3CQ6IPX1 549 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 RETSATQ6NUM9 610 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 TBC1D3Q8IZP1 549 aaPredicted RBP12.54□□□□□ -0.4
CTSA-210ENST00000606000 RNF214Q8ND24 703 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 VOPP1Q96AW1 172 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 HMCESQ96FZ2 354 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 MYOCQ99972 504 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.54□□□□□ -0.4
CTSA-210ENST00000606000 SNRNP25Q9BV90 132 aaKnown RBP12.54□□□□□ -0.4
CTSA-210ENST00000606000 IL36AQ9UHA7 158 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 CAPN11Q9UMQ6 739 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 AP4E1Q9UPM8 1137 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 CA5BQ9Y2D0 317 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 ANKRD6Q9Y2G4 727 aa12.54□□□□□ -0.4
CTSA-210ENST00000606000 A0A087X0T9 212 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 H0Y8X5 98 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 FAM228BP0C875 321 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 GZMAP12544 262 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 CEACAM1P13688 526 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 CASP14P31944 242 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 CCR5P51681 352 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 TPI1P60174 286 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 ZBED6P86452 979 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 SFSWAPQ12872 951 aaKnown RBP12.53□□□□□ -0.4
CTSA-210ENST00000606000 POLD3Q15054 466 aaPredicted RBP12.53□□□□□ -0.4
CTSA-210ENST00000606000 ATXN7L2Q5T6C5 722 aaPredicted RBP12.53□□□□□ -0.4
CTSA-210ENST00000606000 PPP1R2P3Q6NXS1 205 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 ADAT2Q7Z6V5 191 aaKnown RBP12.53□□□□□ -0.4
CTSA-210ENST00000606000 ZNF354CQ86Y25 554 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 NAXDQ8IW45 347 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 KLK6Q92876 244 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 BTBD6Q96KE9 485 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 CCDC114Q96M63 670 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 CNTNAP3BQ96NU0 1288 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 KCTD15Q96SI1 283 aaPredicted RBP12.53□□□□□ -0.4
CTSA-210ENST00000606000 EPAS1Q99814 870 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 CNTNAP3Q9BZ76 1288 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 ZDHHC5Q9C0B5 715 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 CEP44Q9C0F1 390 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 THAP2Q9H0W7 228 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 ISCUQ9H1K1 167 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 MAGEH1Q9H213 219 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 DHX35Q9H5Z1 703 aaKnown RBP12.53□□□□□ -0.4
CTSA-210ENST00000606000 ZDHHC6Q9H6R6 413 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 OSGEPQ9NPF4 335 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 AASDHPPTQ9NRN7 309 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 TM7SF3Q9NS93 570 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 ARHGAP20Q9P2F6 1191 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 BTBD3Q9Y2F9 522 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 DOCK9Q9BZ29 2069 aa12.53□□□□□ -0.4
CTSA-210ENST00000606000 ASCC3Q8N3C0 2202 aaKnown RBP12.53□□□□□ -0.4
CTSA-210ENST00000606000 GON4LQ3T8J9 2241 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 A0A1W2PR77 199 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 UPK3BL1B0FP48 263 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 RASA4BC9J798 803 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 UPK3BL2E5RIL1 263 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 SLC7A4O43246 635 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 RASA4O43374 803 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 LATO43561 262 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 KDELR3O43731 214 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 RNGTTO60942 597 aaKnown RBP12.52□□□□□ -0.41
CTSA-210ENST00000606000 LRCH4O75427 683 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 CER1O95813 267 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 PRNPP04156 253 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 SERPING1P05155 500 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 PRLRP16471 622 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 IL1R2P27930 398 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 MIPP30301 263 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 CTSKP43235 329 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms