RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 PPM1LQ5SGD2 360 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 THEMIS2Q5TEJ8 643 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 ADGRG6Q86SQ4 1221 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 TAC4Q86UU9 113 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 SPNS2Q8IVW8 549 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 DENND6AQ8IWF6 608 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 SCYL1Q96KG9 808 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 TUBGCP5Q96RT8 1024 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 GPR22Q99680 433 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 BRD8Q9H0E9 1235 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 TTC3P53804 2025 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 DFFAO00273 331 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 CAPN15O75808 1086 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 PIGNO95427 931 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 F9P00740 461 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 THP07101 528 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 TFEBP19484 476 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 SERPINB6P35237 376 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 CSRP3P50461 194 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 POU6F1Q14863 301 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 GSTA3Q16772 222 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 LSM12Q3MHD2 195 aaKnown RBP13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 METTL21CQ5VZV1 264 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 PM20D1Q6GTS8 502 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 NAPEPLDQ6IQ20 393 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 SLC41A1Q8IVJ1 513 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 NR1H4Q96RI1 486 aaPredicted RBP13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 VAT1Q99536 393 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 FTHL17Q9BXU8 183 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 NUF2Q9BZD4 464 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 ZDHHC2Q9UIJ5 367 aa13.19□□□□□ -0.3
SRGAP2-209ENST00000604247 RNASEH1O60930 286 aaKnown RBP13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 VAPBO95292 243 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 JUNP05412 331 aaKnown RBP13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 FAM163BP0C2L3 166 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 SLC35E2BP0CK96 405 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 BDNFP23560 247 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 PEX2P28328 305 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 RPL14P50914 215 aaKnown RBP13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 MTTPP55157 894 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 MPP1Q00013 466 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 MAP2K5Q13163 448 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 PRPSAP1Q14558 356 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 TIGD5Q53EQ6 642 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 ZYG11AQ6WRX3 759 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 KDELC2Q7Z4H8 507 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 PDSS2Q86YH6 399 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 FSTL5Q8N475 847 aaPredicted RBP13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 ZNF483Q8TF39 744 aaPredicted RBP13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 SREK1Q8WXA9 508 aaKnown RBP13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 TSC22D3Q99576 134 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 RTKNQ9BST9 563 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 KIFC1Q9BW19 673 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 DRC3Q9H069 523 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 RHOJQ9H4E5 214 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 FAM105AQ9NUU6 356 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 RAP2CQ9Y3L5 183 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 HDAC3O15379 428 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 GRID2O43424 1007 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 RAG1P15918 1043 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 PIK3R1P27986 724 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 PRDX6P30041 224 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 MSX2P35548 267 aaPredicted RBP13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 LIPMQ5VYY2 423 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 TMEM198Q66K66 360 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 ESRP1Q6NXG1 681 aaKnown RBP13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 DCLRE1AQ6PJP8 1040 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 CEP97Q8IW35 865 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 MFSD6LQ8IWD5 586 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 CENPLQ8N0S6 344 aaPredicted RBP13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 TMEM86AQ8N2M4 240 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 IPMKQ8NFU5 416 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 MYLPFQ96A32 169 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 SMARCD1Q96GM5 515 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 OMDQ99983 421 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 RTP3Q9BQQ7 232 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 CDH9Q9ULB4 789 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 ST3GAL5Q9UNP4 418 aa13.18□□□□□ -0.3
SRGAP2-209ENST00000604247 EME2A4GXA9 379 aaPredicted RBP13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 MYADML2A6NDP7 307 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 NUMBP49757 651 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 NUDT2P50583 147 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 SCNN1GP51170 649 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 FKBP1BP68106 108 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 MSLNQ13421 630 aaPredicted RBP13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 SEL1L3Q68CR1 1132 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 TMC7Q7Z402 723 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 SNX32Q86XE0 403 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 LSMEM2Q8N112 164 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 SCAMP5Q8TAC9 235 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 GDPD5Q8WTR4 605 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 PPP2R3CQ969Q6 453 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 RRAGCQ9HB90 399 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 SLC38A7Q9NVC3 462 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 TMLHEQ9NVH6 421 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 SLC2A6Q9UGQ3 507 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 PTCH2Q9Y6C5 1203 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 ARL5CA6NH57 179 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 TARM1B6A8C7 271 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms