RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 SOX13Q9UN79 622 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 RNF24Q9Y225 148 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 CHKBQ9Y259 395 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 PARP4Q9UKK3 1724 aaKnown RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 NFAT5O94916 1531 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 IGSF1Q8N6C5 1336 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 PVALEFA0A1B0GWK0 134 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 TTC26A0AVF1 554 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 ILVBLA1L0T0 632 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 TYW5A2RUC4 315 aaKnown RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 WDR91A4D1P6 747 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 SH3D21A4FU49 640 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 CAPN8A6NHC0 703 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 A8MXQ7 604 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 KLRF2D3W0D1 207 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 EXOC3O60645 756 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 FTCDO95954 541 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 LRG1P02750 347 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 FGF4P08620 206 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 FGFR1P11362 822 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 RAG1P15918 1043 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 ATF6P18850 670 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 TNFSF4P23510 183 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 HMGB2P26583 209 aaKnown RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 HOXA11P31270 313 aaPredicted RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 SLC26A3P40879 764 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 PIP4K2AP48426 406 aaPredicted RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 ATXN3P54252 364 aaPredicted RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 VBP1P61758 197 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 CYP27A1Q02318 531 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 FCHO2Q0JRZ9 810 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 TSTQ16762 297 aaKnown RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 OR7E24Q6IFN5 339 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 CXorf57Q6NSI4 855 aaKnown RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 FBXL19Q6PCT2 694 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 FOXR2Q6PJQ5 311 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 UGT2A3Q6UWM9 527 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 IDO2Q6ZQW0 420 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 CROCCP2Q86T23 111 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 SULF2Q8IWU5 870 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 PRR18Q8N4B5 295 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 CPA6Q8N4T0 437 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 OR14C36Q8NHC7 312 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 ZNF507Q8TCN5 953 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 PTP4A1Q93096 173 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 VPS33AQ96AX1 596 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 PAGE5Q96GU1 130 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 ZNF764Q96H86 408 aaPredicted RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 TAAR9Q96RI9 348 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 TGS1Q96RS0 853 aaKnown RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 MIPEPQ99797 713 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 ARHGAP39Q9C0H5 1083 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 TP63Q9H3D4 680 aaPredicted RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 OSGEPL1Q9H4B0 414 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 IFT22Q9H7X7 185 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 S100A14Q9HCY8 104 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 CD209Q9NNX6 404 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 GIMAP4Q9NUV9 329 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 FAM8A1Q9UBU6 413 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 DBF4Q9UBU7 674 aaPredicted RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 MAGED2Q9UNF1 606 aaPredicted RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 KCNH4Q9UQ05 1017 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 CAB39Q9Y376 341 aaPredicted RBP4.81□□□□□ -1.64
LINC01109-201ENST00000603837 CEPT1Q9Y6K0 416 aa4.81□□□□□ -1.64
LINC01109-201ENST00000603837 MYH10P35580 1976 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 USP42Q9H9J4 1324 aaKnown RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 C2CD2LO14523 706 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 POLR1CO15160 346 aaPredicted RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ITM2AO43736 263 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 PRPSAP2O60256 369 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 SULT1C4O75897 302 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 INHBAP08476 426 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 GFAPP14136 432 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 VCLP18206 1134 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 PAMP19021 973 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 PDIA3P30101 505 aaKnown RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ABCG1P45844 678 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 SLC9A3P48764 834 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 CDK9P50750 372 aaKnown RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 DNA2P51530 1060 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 ARSDP51689 593 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 NKX2-5P52952 324 aaPredicted RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 COPB1P53618 953 aaKnown RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 RPL26P61254 145 aaKnown RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 PHC1P78364 1004 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 TAP2Q03519 686 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 PTPN12Q05209 780 aaKnown RBP4.8□□□□□ -1.64
LINC01109-201ENST00000603837 SLC9A5Q14940 896 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 KRT31Q15323 416 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 MAPRE2Q15555 327 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 RTP2Q5QGT7 225 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 FAM182BQ5T319 152 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 PLA2G4FQ68DD2 849 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 NANOGP8Q6NSW7 305 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 CGB2Q6NT52 195 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 IYDQ6PHW0 289 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 SHC4Q6S5L8 630 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 SEZ6L2Q6UXD5 910 aa4.8□□□□□ -1.64
LINC01109-201ENST00000603837 BEND4Q6ZU67 534 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms