RNA–Protein interactions for RNA: ENST00000602265.5

TIMM50-219, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 2

Gene TIMM50, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-219	ENST00000602265	CLDN11	O75508	207 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	CSF2	P04141	144 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	ALPPL2	P10696	532 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	NME1	P15531	152 aa	Known RBP	13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	DUSP3	P51452	185 aa	Predicted RBP	13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	CDK17	Q00537	523 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	ZNF177	Q13360	481 aa	Predicted RBP	13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	ALF	Q53S48	1182 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	TPRG1L	Q5T0D9	272 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	OR6B2	Q6IFH4	312 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	TTI2	Q6NXR4	508 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	INO80C	Q6PI98	192 aa	Predicted RBP	13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	KYAT3	Q6YP21	454 aa	Known RBP	13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265		Q6ZSR6	202 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	ERN2	Q76MJ5	926 aa	Known RBP	13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	DCP2	Q8IU60	420 aa	Known RBP	13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	TRIM59	Q8IWR1	403 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	FAM174A	Q8TBP5	190 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	MAPK15	Q8TD08	544 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	VOPP1	Q96AW1	172 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	MED8	Q96G25	268 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	KLF6	Q99612	283 aa	Predicted RBP	13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	DUSP23	Q9BVJ7	150 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	DNAJC28	Q9NX36	388 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	VPS51	Q9UID3	782 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	PCDHGA8	Q9Y5G5	932 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	CSNK1G3	Q9Y6M4	447 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	WASF2	Q9Y6W5	498 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	AHCTF1	Q8WYP5	2266 aa		13.71	□□□□□ -0.21
TIMM50-219	ENST00000602265	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	EME2	A4GXA9	379 aa	Predicted RBP	13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265		A6NNZ2	444 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	BECN2	A8MW95	431 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	PYCARD-AS1	I3L0S3	204 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	LETM1	O95202	739 aa	Predicted RBP	13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	RRM1	P23921	792 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	PDX1	P52945	283 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	CDH4	P55283	916 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	ARSI	Q5FYB1	569 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	C3orf38	Q5JPI3	329 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	GUSBP11	Q6P575	273 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	FOXR2	Q6PJQ5	311 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	GRAMD1A	Q96CP6	724 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	ATXN7L3B	Q96GX2	97 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	CPXM1	Q96SM3	734 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	SLC17A9	Q9BYT1	436 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	GDPD2	Q9HCC8	539 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	SALL4	Q9UJQ4	1053 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	UNC13C	Q8NB66	2214 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	FLNC	Q14315	2725 aa		13.7	□□□□□ -0.22
TIMM50-219	ENST00000602265	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265		A0A0D9SEW6	157 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	DRGX	A6NNA5	263 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	SPINT1	O43278	529 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	MED7	O43513	233 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	HSF2BP	O75031	334 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	PCDH8	O95206	1070 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	PRNP	P04156	253 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	BMP6	P22004	513 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	GNA15	P30679	374 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	CLCN6	P51797	869 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	MARS	P56192	900 aa	Known RBP	13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	CCDC15	Q0P6D6	951 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	CETN1	Q12798	172 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	CLN3	Q13286	438 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	MTA1	Q13330	715 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	CDKN3	Q16667	212 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	CCDC40	Q4G0X9	1142 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	EFHC1	Q5JVL4	640 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	PERM1	Q5SV97	790 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	KIAA1614	Q5VZ46	1190 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	C22orf39	Q6P5X5	142 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	OLFML1	Q6UWY5	402 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	CLEC14A	Q86T13	490 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	ATP11C	Q8NB49	1132 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	INTS2	Q9H0H0	1204 aa	Known RBP	13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	ABCG4	Q9H172	646 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	CLMP	Q9H6B4	373 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	ARHGEF38	Q9NXL2	777 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	COX16	Q9P0S2	106 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	ZNF212	Q9UDV6	495 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	FADS3	Q9Y5Q0	445 aa		13.69	□□□□□ -0.22
TIMM50-219	ENST00000602265	TPP1	O14773	563 aa		13.68	□□□□□ -0.22
TIMM50-219	ENST00000602265	EFS	O43281	561 aa		13.68	□□□□□ -0.22
TIMM50-219	ENST00000602265	THAP12	O43422	761 aa		13.68	□□□□□ -0.22
TIMM50-219	ENST00000602265	LEFTY1	O75610	366 aa		13.68	□□□□□ -0.22
TIMM50-219	ENST00000602265	GRAP2	O75791	330 aa		13.68	□□□□□ -0.22
TIMM50-219	ENST00000602265	ZMPSTE24	O75844	475 aa		13.68	□□□□□ -0.22
TIMM50-219	ENST00000602265	ADCY5	O95622	1261 aa		13.68	□□□□□ -0.22
TIMM50-219	ENST00000602265	PAK4	O96013	591 aa	Predicted RBP	13.68	□□□□□ -0.22
TIMM50-219	ENST00000602265	RHOC	P08134	193 aa		13.68	□□□□□ -0.22
TIMM50-219	ENST00000602265	KRT10	P13645	584 aa		13.68	□□□□□ -0.22
TIMM50-219	ENST00000602265	KRT5	P13647	590 aa		13.68	□□□□□ -0.22
TIMM50-219	ENST00000602265	KRT83	P78385	493 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms