RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-215ENST00000602164 ZSCAN5CA6NGD5 496 aaPredicted RBP27.34■■□□□ 1.97
USF2-215ENST00000602164 C10orf142B7Z368 130 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 RNF103O00237 685 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 DAPK3O43293 454 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 IL1BP01584 269 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 IL4RP24394 825 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 CYLC1P35663 651 aaPredicted RBP27.34■■□□□ 1.97
USF2-215ENST00000602164 ARL4AP40617 200 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 ARHGAP25P42331 645 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 MESDQ14696 234 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 HADHQ16836 314 aaKnown RBP27.34■■□□□ 1.97
USF2-215ENST00000602164 ATP13A4Q4VNC1 1196 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 RAD9BQ6WBX8 426 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 DPY19L3Q6ZPD9 716 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 PRR23CQ6ZRP0 262 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 DSG4Q86SJ6 1040 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 VOPP1Q96AW1 172 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 PCED1AQ9H1Q7 454 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 VPS45Q9NRW7 570 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 ETNK2Q9NVF9 386 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 PILRBQ9UKJ0 227 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 FZD4Q9ULV1 537 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 PCDHA13Q9Y5I0 950 aa27.34■■□□□ 1.97
USF2-215ENST00000602164 TMEM110-MUSTN1A8MSY1 372 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 BNIP3LO60238 219 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 NDUFA10O95299 355 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 CD48P09326 243 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 CHRNA3P32297 505 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 SSR1P43307 286 aaKnown RBP27.33■■□□□ 1.97
USF2-215ENST00000602164 SF3A2Q15428 464 aaKnown RBP27.33■■□□□ 1.97
USF2-215ENST00000602164 SYT12Q8IV01 421 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 PIP4K2CQ8TBX8 421 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 PIGKQ92643 395 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 CCDC114Q96M63 670 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 BTBD1Q9H0C5 482 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 NEUROG2Q9H2A3 272 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 SGK2Q9HBY8 427 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 RCOR3Q9P2K3 495 aaPredicted RBP27.33■■□□□ 1.97
USF2-215ENST00000602164 TFR2Q9UP52 801 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 REXO2Q9Y3B8 237 aaKnown RBP27.33■■□□□ 1.97
USF2-215ENST00000602164 EPN1Q9Y6I3 576 aaPredicted RBP27.33■■□□□ 1.97
USF2-215ENST00000602164 WASF2Q9Y6W5 498 aa27.33■■□□□ 1.97
USF2-215ENST00000602164 ATXN2Q99700 1313 aaKnown RBP27.33■■□□□ 1.97
USF2-215ENST00000602164 RNASEH2AO75792 299 aaKnown RBP27.32■■□□□ 1.96
USF2-215ENST00000602164 SEMA4FO95754 770 aa27.32■■□□□ 1.96
USF2-215ENST00000602164 AMPD1P23109 780 aa27.32■■□□□ 1.96
USF2-215ENST00000602164 HADHBP55084 474 aaKnown RBP27.32■■□□□ 1.96
USF2-215ENST00000602164 CDH6P55285 790 aa27.32■■□□□ 1.96
USF2-215ENST00000602164 TCEAL6Q6IPX3 200 aa27.32■■□□□ 1.96
USF2-215ENST00000602164 TP53INP2Q8IXH6 220 aa27.32■■□□□ 1.96
USF2-215ENST00000602164 PLPP6Q8IY26 295 aa27.32■■□□□ 1.96
USF2-215ENST00000602164 SPC24Q8NBT2 197 aa27.32■■□□□ 1.96
USF2-215ENST00000602164 NETO2Q8NC67 525 aa27.32■■□□□ 1.96
USF2-215ENST00000602164 FOXJ1Q92949 421 aa27.32■■□□□ 1.96
USF2-215ENST00000602164 TCEAL3Q969E4 200 aa27.32■■□□□ 1.96
USF2-215ENST00000602164 C6orf106Q9H6K1 298 aaPredicted RBP27.32■■□□□ 1.96
USF2-215ENST00000602164 NCKAP1Q9Y2A7 1128 aa27.32■■□□□ 1.96
USF2-215ENST00000602164 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.32■■□□□ 1.96
USF2-215ENST00000602164 DMXL1Q9Y485 3027 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 METTL12A8MUP2 240 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 BUB1O43683 1085 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 PRAMEF11O60813 436 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 TMCC1O94876 653 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 HOXD12P35452 270 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 GJC1P36383 396 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 PAPOLAP51003 745 aaKnown RBP27.31■■□□□ 1.96
USF2-215ENST00000602164 MMRN1Q13201 1228 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 DPYSL3Q14195 570 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 SPA17Q15506 151 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 INO80DQ53TQ3 878 aaPredicted RBP27.31■■□□□ 1.96
USF2-215ENST00000602164 CARD16Q5EG05 197 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 FAM46CQ5VWP2 391 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 ZNF354CQ86Y25 554 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 HDDC3Q8N4P3 179 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 TMIEQ8NEW7 156 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 CASKIN2Q8WXE0 1202 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 DNASE2BQ8WZ79 361 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 OMDQ99983 421 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 TM6SF2Q9BZW4 377 aa27.31■■□□□ 1.96
USF2-215ENST00000602164 ARHGAP42A6NI28 874 aa27.3■■□□□ 1.96
USF2-215ENST00000602164 PATE3B3GLJ2 98 aa27.3■■□□□ 1.96
USF2-215ENST00000602164 C1QTNF3-AMACRE9PGA6 284 aa27.3■■□□□ 1.96
USF2-215ENST00000602164 J3KR12 359 aa27.3■■□□□ 1.96
USF2-215ENST00000602164 PLK4O00444 970 aa27.3■■□□□ 1.96
USF2-215ENST00000602164 GSRP00390 522 aa27.3■■□□□ 1.96
USF2-215ENST00000602164 DPP6P42658 865 aa27.3■■□□□ 1.96
USF2-215ENST00000602164 CCNHP51946 323 aaPredicted RBP27.3■■□□□ 1.96
USF2-215ENST00000602164 SFSWAPQ12872 951 aaKnown RBP27.3■■□□□ 1.96
USF2-215ENST00000602164 KRT81Q14533 505 aa27.3■■□□□ 1.96
USF2-215ENST00000602164 LZTR1Q8N653 840 aa27.3■■□□□ 1.96
USF2-215ENST00000602164 GANCQ8TET4 914 aa27.3■■□□□ 1.96
USF2-215ENST00000602164 KLHL11Q9NVR0 708 aa27.3■■□□□ 1.96
USF2-215ENST00000602164 FARP1Q9Y4F1 1045 aaPredicted RBP27.3■■□□□ 1.96
USF2-215ENST00000602164 GON4LQ3T8J9 2241 aa27.3■■□□□ 1.96
USF2-215ENST00000602164 RCCD1A6NED2 376 aa27.29■■□□□ 1.96
USF2-215ENST00000602164 KRT7P08729 469 aa27.29■■□□□ 1.96
USF2-215ENST00000602164 ADPRHP54922 357 aa27.29■■□□□ 1.96
USF2-215ENST00000602164 CNTN1Q12860 1018 aa27.29■■□□□ 1.96
USF2-215ENST00000602164 POM121L1PQ3SYA9 428 aa27.29■■□□□ 1.96
USF2-215ENST00000602164 AGBL4Q5VU57 503 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms