RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 NDC80O14777 642 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 HOXC11O43248 304 aaPredicted RBP17.79■□□□□ 0.44
DDX49-213ENST00000602113 CACNG3O60359 315 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 ADH1CP00326 375 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 APRTP07741 180 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 SP100P23497 879 aaPredicted RBP17.79■□□□□ 0.44
DDX49-213ENST00000602113 PDGFRLQ15198 375 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 GAB4Q2WGN9 574 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 PLEKHG6Q3KR16 790 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 GPR153Q6NV75 609 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 LINGO4Q6UY18 593 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.79■□□□□ 0.44
DDX49-213ENST00000602113 NAT16Q8N8M0 369 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 ATP2A3Q93084 1043 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 EXOC4Q96A65 974 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 MLPHQ9BV36 600 aaPredicted RBP17.79■□□□□ 0.44
DDX49-213ENST00000602113 ARFGAP3Q9NP61 516 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 UBA2Q9UBT2 640 aaPredicted RBP17.79■□□□□ 0.44
DDX49-213ENST00000602113 TTLL3Q9Y4R7 772 aa17.79■□□□□ 0.44
DDX49-213ENST00000602113 MUSKO15146 869 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 TRIM24O15164 1050 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 ECI2O75521 394 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 NFATC1O95644 943 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 TPSB2P20231 275 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 TPSAB1Q15661 275 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 FUT11Q495W5 492 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 PITRM1Q5JRX3 1037 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 PPM1EQ8WY54 764 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 OXNAD1Q96HP4 312 aaPredicted RBP17.78■□□□□ 0.44
DDX49-213ENST00000602113 SLC2A11Q9BYW1 496 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 TXLNGYQ9BZA5 131 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 DNAJC17Q9NVM6 304 aaKnown RBP17.78■□□□□ 0.44
DDX49-213ENST00000602113 GGA2Q9UJY4 613 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 FBXO10Q9UK96 956 aa17.78■□□□□ 0.44
DDX49-213ENST00000602113 E7EVH7 732 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 NEBLO76041 1014 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 FOSL2P15408 326 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 PSMC3P17980 439 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 MAXP61244 160 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 SMAD4Q13485 552 aaKnown RBP17.77■□□□□ 0.44
DDX49-213ENST00000602113 SLC12A1Q13621 1099 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 CYTH1Q15438 398 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 SKIV2LQ15477 1246 aaKnown RBP17.77■□□□□ 0.44
DDX49-213ENST00000602113 TMC3Q7Z5M5 1100 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 C12orf40Q86WS4 652 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 KLHDC8BQ8IXV7 354 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 DEFB123Q8N688 67 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 PDCD7Q8N8D1 485 aaKnown RBP17.77■□□□□ 0.44
DDX49-213ENST00000602113 SPATA22Q8NHS9 363 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 FCRL5Q96RD9 977 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 C2orf49Q9BVC5 232 aaPredicted RBP17.77■□□□□ 0.44
DDX49-213ENST00000602113 ECT2Q9H8V3 914 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 ZNF446Q9NWS9 450 aa17.77■□□□□ 0.44
DDX49-213ENST00000602113 ANHXE9PGG2 379 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 SMAPO00193 183 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 MBTPS2O43462 519 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 MT-CO1P00395 513 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 CISD3P0C7P0 127 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 PABPC1P11940 636 aaKnown RBP17.77■□□□□ 0.43
DDX49-213ENST00000602113 GRIA1P42261 906 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 TNNT3P45378 269 aaPredicted RBP17.77■□□□□ 0.43
DDX49-213ENST00000602113 DHX9Q08211 1270 aaKnown RBP17.77■□□□□ 0.43
DDX49-213ENST00000602113 NIPAL4Q0D2K0 466 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 HTR4Q13639 388 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 ZNF235Q14590 738 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 IHHQ14623 411 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 RFTN1Q14699 578 aaPredicted RBP17.77■□□□□ 0.43
DDX49-213ENST00000602113 FNBP1LQ5T0N5 605 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 KCTD11Q693B1 232 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 ZNF534Q76KX8 674 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 KIAA0907Q7Z7F0 614 aaPredicted RBP17.77■□□□□ 0.43
DDX49-213ENST00000602113 CCDC25Q86WR0 208 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 YAF2Q8IY57 180 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.77■□□□□ 0.43
DDX49-213ENST00000602113 TSEN2Q8NCE0 465 aaKnown RBP17.77■□□□□ 0.43
DDX49-213ENST00000602113 FOXP3Q9BZS1 431 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 EIF2B3Q9NR50 452 aaKnown RBP17.77■□□□□ 0.43
DDX49-213ENST00000602113 UBP1Q9NZI7 540 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 SEPT3Q9UH03 358 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 NUMBLQ9Y6R0 609 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 XIRP2A4UGR9 3374 aa17.77■□□□□ 0.43
DDX49-213ENST00000602113 MYO18AQ92614 2054 aaKnown RBP17.76■□□□□ 0.43
DDX49-213ENST00000602113 TTC24A2A3L6 582 aaPredicted RBP17.76■□□□□ 0.43
DDX49-213ENST00000602113 PPFIA2O75334 1257 aa17.76■□□□□ 0.43
DDX49-213ENST00000602113 GJB3O75712 270 aa17.76■□□□□ 0.43
DDX49-213ENST00000602113 HSPA9P38646 679 aaKnown RBP17.76■□□□□ 0.43
DDX49-213ENST00000602113 CTSOP43234 321 aaPredicted RBP17.76■□□□□ 0.43
DDX49-213ENST00000602113 DSC2Q02487 901 aa17.76■□□□□ 0.43
DDX49-213ENST00000602113 SPARCL1Q14515 664 aa17.76■□□□□ 0.43
DDX49-213ENST00000602113 MSS51Q4VC12 460 aa17.76■□□□□ 0.43
DDX49-213ENST00000602113 MTSS1LQ765P7 747 aa17.76■□□□□ 0.43
DDX49-213ENST00000602113 PRPF39Q86UA1 669 aaKnown RBP17.76■□□□□ 0.43
DDX49-213ENST00000602113 CAND1Q86VP6 1230 aaKnown RBP17.76■□□□□ 0.43
DDX49-213ENST00000602113 ETFBKMTQ8IXQ9 262 aa17.76■□□□□ 0.43
DDX49-213ENST00000602113 ZNF557Q8N988 423 aaPredicted RBP17.76■□□□□ 0.43
DDX49-213ENST00000602113 MCUQ8NE86 351 aa17.76■□□□□ 0.43
DDX49-213ENST00000602113 ARRDC2Q8TBH0 407 aa17.76■□□□□ 0.43
DDX49-213ENST00000602113 ACDQ96AP0 544 aa17.76■□□□□ 0.43
DDX49-213ENST00000602113 IMP4Q96G21 291 aaKnown RBP17.76■□□□□ 0.43
DDX49-213ENST00000602113 PSKH2Q96QS6 385 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms