RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 ALLCQ8N6M5 410 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 CCDC89Q8N998 374 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 BBOF1Q8ND07 529 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 ACTL9Q8TC94 416 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.3□□□□□ -0.76
UPF1-213ENST00000601981 MYEOVQ96EZ4 313 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 SNF8Q96H20 258 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 RNF157Q96PX1 679 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 FMO2Q99518 471 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 MAGEH1Q9H213 219 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 CHRDQ9H2X0 955 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 ELOVL2Q9NXB9 296 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 MTRF1LQ9UGC7 380 aaKnown RBP10.3□□□□□ -0.76
UPF1-213ENST00000601981 ASIC3Q9UHC3 531 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 FAM153AQ9UHL3 310 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 DNPEPQ9ULA0 475 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 CLEC4EQ9ULY5 219 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 SNX24Q9Y343 169 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 STARD13Q9Y3M8 1113 aa10.3□□□□□ -0.76
UPF1-213ENST00000601981 CKAP5Q14008 2032 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 ARHGAP42A6NI28 874 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 SHISA7A6NL88 538 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 CHURC1-FNTBB4DL54 471 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 K7EQS6 105 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 APOL1O14791 398 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 MCF2LO15068 1137 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 TRIM24O15164 1050 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 DCNP07585 359 aaKnown RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 SRPRAP08240 638 aaKnown RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 DLDP09622 509 aaKnown RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 HNRNPLP14866 589 aaKnown RBP eCLIP10.29□□□□□ -0.76
UPF1-213ENST00000601981 ZFXP17010 805 aaPredicted RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 ERCC2P18074 760 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 ITIH2P19823 946 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 IL4RP24394 825 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 TIE1P35590 1138 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 IRAK1P51617 712 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 CCR3P51677 355 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 NDST2P52849 883 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 NUBP1P53384 320 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 YBEYP58557 167 aaPredicted RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 DYNLT1P63172 113 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 GNA12Q03113 381 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 CALCOCO2Q13137 446 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 MMRN1Q13201 1228 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 STARD3Q14849 445 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 POLD3Q15054 466 aaPredicted RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 NOMO1Q15155 1222 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 PARP15Q460N3 678 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 FUT11Q495W5 492 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 FNDC3BQ53EP0 1204 aaKnown RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 C2orf27AQ580R0 203 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 ANKRD20A8PQ5CZ79 823 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 FSCBQ5H9T9 825 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 ALS2CLQ60I27 953 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 NAIF1Q69YI7 327 aaPredicted RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 IL31Q6EBC2 164 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 CXorf57Q6NSI4 855 aaKnown RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 RETSATQ6NUM9 610 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 KIAA0907Q7Z7F0 614 aaPredicted RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 NLRP14Q86W24 1093 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 CHPFQ8IZ52 775 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 SPEM1Q8N4L4 309 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 DCAF4L2Q8NA75 395 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 RPLP0P6Q8NHW5 317 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 WFDC5Q8TCV5 224 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 ART4Q93070 314 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 HAUS1Q96CS2 278 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 GDAP1L1Q96MZ0 367 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 CSPG4P5Q96PW8 444 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 FEM1AQ9BSK4 669 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 PCDH9Q9HC56 1237 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 FBRSL1Q9HCM7 1045 aaKnown RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 ATP13A1Q9HD20 1204 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 SPATA6Q9NWH7 488 aaPredicted RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 CWC15Q9P013 229 aaKnown RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 ZNF148Q9UQR1 794 aa10.29□□□□□ -0.76
UPF1-213ENST00000601981 MTF2Q9Y483 593 aaPredicted RBP10.29□□□□□ -0.76
UPF1-213ENST00000601981 PIEZO1Q92508 2521 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 CXorf51AA0A1B0GTR3 108 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 GOLGA6BA6NDN3 693 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 PRRT4C9JH25 899 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 LAMTOR5O43504 91 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 PPFIA2O75334 1257 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 KRT14P02533 472 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 PECAM1P16284 738 aaPredicted RBP10.28□□□□□ -0.76
UPF1-213ENST00000601981 IVDP26440 423 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 MZF1P28698 734 aaPredicted RBP10.28□□□□□ -0.76
UPF1-213ENST00000601981 AVPR2P30518 371 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 NTSR1P30989 418 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 KIR2DL1P43626 348 aaPredicted RBP10.28□□□□□ -0.76
UPF1-213ENST00000601981 PLTPP55058 493 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 EIF3EP60228 445 aaKnown RBP10.28□□□□□ -0.76
UPF1-213ENST00000601981 ECT2LQ008S8 904 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 DPYSQ14117 519 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 SERPINA13PQ6UXR4 307 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 GSTA5Q7RTV2 222 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 TMC3Q7Z5M5 1100 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 METTL3Q86U44 580 aaKnown RBP10.28□□□□□ -0.76
UPF1-213ENST00000601981 ADIPOR2Q86V24 386 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms