RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 RNF43Q68DV7 783 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 KCTD11Q693B1 232 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 NAPEPLDQ6IQ20 393 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 LEKR1Q6ZMV7 388 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 LINC00523Q86TU6 105 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 TMEM25Q86YD3 366 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 ANKMY2Q8IV38 441 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 PALM2Q8IXS6 379 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 GORASP1Q9BQQ3 440 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 MLPHQ9BV36 600 aaPredicted RBP18.31■□□□□ 0.52
VRK3-225ENST00000601912 BBS2Q9BXC9 721 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 POLR1EQ9GZS1 481 aaKnown RBP18.31■□□□□ 0.52
VRK3-225ENST00000601912 LINC00597Q9H2U6 94 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 WNT6Q9Y6F9 365 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 TNRC18O15417 2968 aaPredicted RBP18.3■□□□□ 0.52
VRK3-225ENST00000601912 CDH23Q9H251 3354 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 BANF1O75531 89 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 PENKP01210 267 aaPredicted RBP18.3■□□□□ 0.52
VRK3-225ENST00000601912 MAGEA3P43357 314 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 NUMBP49757 651 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 MTM1Q13496 603 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 SLC12A1Q13621 1099 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 EP400NLQ6ZTU2 488 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 ZNF534Q76KX8 674 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 KLHDC8BQ8IXV7 354 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 ADGRG2Q8IZP9 1017 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 DCAF4L2Q8NA75 395 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 ATP11CQ8NB49 1132 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 FBXO36Q8NEA4 188 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 WFDC5Q8TCV5 224 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 BPIFB1Q8TDL5 484 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 OXNAD1Q96HP4 312 aaPredicted RBP18.3■□□□□ 0.52
VRK3-225ENST00000601912 C2orf49Q9BVC5 232 aaPredicted RBP18.3■□□□□ 0.52
VRK3-225ENST00000601912 CINPQ9BW66 212 aaPredicted RBP18.3■□□□□ 0.52
VRK3-225ENST00000601912 MED4Q9NPJ6 270 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 DUS2Q9NX74 493 aaKnown RBP18.3■□□□□ 0.52
VRK3-225ENST00000601912 OBP2AQ9NY56 170 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 UBP1Q9NZI7 540 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 CLEC1BQ9P126 229 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 CDH7Q9ULB5 785 aa18.3■□□□□ 0.52
VRK3-225ENST00000601912 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.3■□□□□ 0.52
VRK3-225ENST00000601912 NUP210Q8TEM1 1887 aaPredicted RBP18.29■□□□□ 0.52
VRK3-225ENST00000601912 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.29■□□□□ 0.52
VRK3-225ENST00000601912 GOLGA6L10A6NI86 522 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 NEDD8-MDP1E9PL57 170 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 AGPSO00116 658 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 ABHD2P08910 425 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 TSHRP16473 764 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 GLDCP23378 1020 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 PHBP35232 272 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 VIPR2P41587 438 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 ELK3P41970 407 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 GRIA1P42261 906 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 GEMIN4P57678 1058 aaKnown RBP18.29■□□□□ 0.52
VRK3-225ENST00000601912 MPP3Q13368 585 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 SPARCL1Q14515 664 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 CEP85LQ5SZL2 805 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 CROCCP2Q86T23 111 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 SPATA22Q8NHS9 363 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 OSCP1Q8WVF1 389 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 ACDQ96AP0 544 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 IMP4Q96G21 291 aaKnown RBP18.29■□□□□ 0.52
VRK3-225ENST00000601912 PKNOX2Q96KN3 472 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 RIPOR3Q96MK2 946 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 CCDC77Q9BR77 488 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 VPS37BQ9H9H4 285 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 LRRC4CQ9HCJ2 640 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 VPS45Q9NRW7 570 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 CLDND1Q9NY35 253 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 OR51B4Q9Y5P0 310 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 NFS1Q9Y697 457 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 MTCH2Q9Y6C9 303 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 TEX264Q9Y6I9 313 aa18.29■□□□□ 0.52
VRK3-225ENST00000601912 A0A087WUV0 522 aaPredicted RBP18.28■□□□□ 0.52
VRK3-225ENST00000601912 SDR42E2A6NKP2 422 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 MT-CYBP00156 380 aaPredicted RBP18.28■□□□□ 0.52
VRK3-225ENST00000601912 CPP00450 1065 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 MAXP61244 160 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 LMAN2Q12907 356 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 GRIN2CQ14957 1233 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 LY6G5CQ5SRR4 150 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 RETSATQ6NUM9 610 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 DNAAF3Q8N9W5 541 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 OR2W6PQ8NHA6 318 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 UHMK1Q8TAS1 419 aaKnown RBP18.28■□□□□ 0.52
VRK3-225ENST00000601912 E2F7Q96AV8 911 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 ZBTB9Q96C00 473 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 ALG14Q96F25 216 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 PSKH2Q96QS6 385 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 FSD1LQ9BXM9 530 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 TRPV4Q9HBA0 871 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 THG1LQ9NWX6 298 aaKnown RBP18.28■□□□□ 0.52
VRK3-225ENST00000601912 MARK1Q9P0L2 795 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 CDH22Q9UJ99 828 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 CHMP2BQ9UQN3 213 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 PRRC2BQ5JSZ5 2229 aaKnown RBP18.28■□□□□ 0.52
VRK3-225ENST00000601912 SNAP91O60641 907 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 ZMPSTE24O75844 475 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 TYRP14679 529 aa18.28■□□□□ 0.52
VRK3-225ENST00000601912 PLK1P53350 603 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms