RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 DONSONQ9NYP3 566 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 ARHGAP20Q9P2F6 1191 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 AP4E1Q9UPM8 1137 aa17.55■□□□□ 0.4
HERC3-214ENST00000601319 DOCK9Q9BZ29 2069 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 MED19A0JLT2 244 aaPredicted RBP17.54■□□□□ 0.4
HERC3-214ENST00000601319 UPK3BL1B0FP48 263 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 UPK3BL2E5RIL1 263 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 PLRG1O43660 514 aaKnown RBP17.54■□□□□ 0.4
HERC3-214ENST00000601319 FSBPO95073 299 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 CD160O95971 181 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 PRNPP04156 253 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 CTSLP07711 333 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 CHRNA3P32297 505 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 PCK1P35558 622 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 RECQLP46063 649 aaPredicted RBP17.54■□□□□ 0.4
HERC3-214ENST00000601319 GRIA4P48058 902 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 ZNF135P52742 658 aaPredicted RBP17.54■□□□□ 0.4
HERC3-214ENST00000601319 METAP1P53582 386 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 POLD3Q15054 466 aaPredicted RBP17.54■□□□□ 0.4
HERC3-214ENST00000601319 PARP15Q460N3 678 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 AGBL4Q5VU57 503 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 NCEH1Q6PIU2 408 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 VSTM4Q8IW00 320 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 UMODL1-AS1Q8N2C9 162 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 MINDY1Q8N5J2 469 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 NIPA2Q8N8Q9 360 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 PEBP4Q96S96 227 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 SNRNP25Q9BV90 132 aaKnown RBP17.54■□□□□ 0.4
HERC3-214ENST00000601319 FSCN3Q9NQT6 498 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 MYO1AQ9UBC5 1043 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 HPCAL4Q9UM19 191 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 ANKRD36A6QL64 1941 aa17.54■□□□□ 0.4
HERC3-214ENST00000601319 LATO43561 262 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 CREB3O43889 395 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 PRPSAP2O60256 369 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 GJB3O75712 270 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 CSRP1P21291 193 aaKnown RBP17.53■□□□□ 0.4
HERC3-214ENST00000601319 MIPP30301 263 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 TPI1P60174 286 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 CNTN1Q12860 1018 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 ERMARDQ5T6L9 678 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 IL27RAQ6UWB1 636 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 RNF214Q8ND24 703 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 CASKIN2Q8WXE0 1202 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 GTPBP2Q9BX10 602 aaKnown RBP17.53■□□□□ 0.4
HERC3-214ENST00000601319 THAP2Q9H0W7 228 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 TM9SF3Q9HD45 589 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 IL36AQ9UHA7 158 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 SLCO1B1Q9Y6L6 691 aa17.53■□□□□ 0.4
HERC3-214ENST00000601319 A0A1W2PPC4 97 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 FAM47DPA6NHR8 397 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 KDELR3O43731 214 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 BNIP3LO60238 219 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 OPHN1O60890 802 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 CYP1A2P05177 515 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 NUDT1P36639 197 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 CCDC15Q0P6D6 951 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 SLC14A1Q13336 389 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 PIGHQ14442 188 aaPredicted RBP17.52■□□□□ 0.4
HERC3-214ENST00000601319 TEAD4Q15561 434 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 PIP5KL1Q5T9C9 394 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 ALKBH5Q6P6C2 394 aaKnown RBP17.52■□□□□ 0.4
HERC3-214ENST00000601319 SARM1Q6SZW1 724 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.52■□□□□ 0.4
HERC3-214ENST00000601319 DPY19L3Q6ZPD9 716 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 TRIM69Q86WT6 500 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 OR8K1Q8NGG5 319 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 OR14C36Q8NHC7 312 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 PPP1R16AQ96I34 528 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 TNKS2Q9H2K2 1166 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 DHX35Q9H5Z1 703 aaKnown RBP17.52■□□□□ 0.4
HERC3-214ENST00000601319 PREBQ9HCU5 417 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 WASF2Q9Y6W5 498 aa17.52■□□□□ 0.4
HERC3-214ENST00000601319 SSU72P8A0A1W2PR75 194 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 EEF2KO00418 725 aaKnown RBP17.51■□□□□ 0.39
HERC3-214ENST00000601319 KCNK5O95279 499 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 CER1O95813 267 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 GSRP00390 522 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 TPM1P09493 284 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 ZNF883P0CG24 379 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 CCNHP51946 323 aaPredicted RBP17.51■□□□□ 0.39
HERC3-214ENST00000601319 NDST2P52849 883 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 RACK1P63244 317 aaKnown RBP17.51■□□□□ 0.39
HERC3-214ENST00000601319 BNC1Q01954 994 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 SERINC3Q13530 473 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 SLC18A3Q16572 532 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 CA9Q16790 459 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 CARD16Q5EG05 197 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 CHST14Q8NCH0 376 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 HMCESQ96FZ2 354 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 LRIG1Q96JA1 1093 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 HDAC8Q9BY41 377 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 LRRC19Q9H756 370 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 GPATCH2LQ9NWQ4 482 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 PCSK1NQ9UHG2 260 aa17.51■□□□□ 0.39
HERC3-214ENST00000601319 FCF1Q9Y324 198 aaKnown RBP17.51■□□□□ 0.39
HERC3-214ENST00000601319 CEP295Q9C0D2 2601 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 RASA4BC9J798 803 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 KPNA3O00505 521 aaPredicted RBP17.5■□□□□ 0.39
HERC3-214ENST00000601319 RASA4O43374 803 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms