RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 STEAP4Q687X5 459 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 UNC5AQ6ZN44 842 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 CFAP52Q8N1V2 620 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 ANKRD42Q8N9B4 389 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 USP33Q8TEY7 942 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 DYDC1Q8WWB3 177 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 TMA16Q96EY4 203 aaKnown RBP20.39■□□□□ 0.86
PNKP-214ENST00000600573 PRICKLE1Q96MT3 831 aaPredicted RBP20.39■□□□□ 0.86
PNKP-214ENST00000600573 SLC22A12Q96S37 553 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 CCT8L2Q96SF2 557 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 GORASP1Q9BQQ3 440 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 MLPHQ9BV36 600 aaPredicted RBP20.39■□□□□ 0.86
PNKP-214ENST00000600573 TASP1Q9H6P5 420 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 SSU72Q9NP77 194 aaKnown RBP20.39■□□□□ 0.86
PNKP-214ENST00000600573 SAMD15Q9P1V8 674 aa20.39■□□□□ 0.86
PNKP-214ENST00000600573 IQANK1A0A1B0GTG1 560 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.38■□□□□ 0.85
PNKP-214ENST00000600573 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.38■□□□□ 0.85
PNKP-214ENST00000600573 FAM47DPA6NHR8 397 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 FOXO6A8MYZ6 492 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 GFRA2O00451 464 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 CES1P23141 567 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 IRS1P35568 1242 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 RAB30Q15771 203 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 MPP5Q8N3R9 675 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 DNAAF3Q8N9W5 541 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 ADAMTS19Q8TE59 1207 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 MYEOVQ96EZ4 313 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 CHMP6Q96FZ7 201 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 IL22Q9GZX6 179 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 E2F8A0AVK6 867 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 GRXCR1A8MXD5 290 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 J3KR12 359 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 HLA-DQB2P05538 268 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 POLBP06746 335 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 GBP2P32456 591 aaPredicted RBP20.38■□□□□ 0.85
PNKP-214ENST00000600573 GRIA1P42261 906 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 CCT5P48643 541 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 SLC18A1P54219 525 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 RPS24P62847 133 aaKnown RBP20.38■□□□□ 0.85
PNKP-214ENST00000600573 LBRQ14739 615 aaKnown RBP20.38■□□□□ 0.85
PNKP-214ENST00000600573 LGSNQ5TDP6 509 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 OTOP3Q7RTS5 596 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 CIR1Q86X95 450 aaPredicted RBP20.38■□□□□ 0.85
PNKP-214ENST00000600573 MGARPQ8TDB4 240 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 TTC17Q96AE7 1141 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 PABPC5Q96DU9 382 aaKnown RBP20.38■□□□□ 0.85
PNKP-214ENST00000600573 IMP4Q96G21 291 aaKnown RBP20.38■□□□□ 0.85
PNKP-214ENST00000600573 SGSM3Q96HU1 749 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 SLC46A2Q9BY10 475 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 ACE2Q9BYF1 805 aaPredicted RBP20.38■□□□□ 0.85
PNKP-214ENST00000600573 PRKD2Q9BZL6 878 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 PLAC1Q9HBJ0 212 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 MSRAQ9UJ68 235 aa20.38■□□□□ 0.85
PNKP-214ENST00000600573 ALDH1A2O94788 518 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 PAPLNO95428 1278 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 AVPR1AP37288 418 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 HNRNPH2P55795 449 aaKnown RBP20.37■□□□□ 0.85
PNKP-214ENST00000600573 SESN2P58004 480 aaPredicted RBP20.37■□□□□ 0.85
PNKP-214ENST00000600573 NAB1Q13506 487 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 SLC14A2Q15849 920 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 MPPE1Q53F39 396 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 SPANXN3Q5MJ09 141 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 IL31Q6EBC2 164 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 CASC4Q6P4E1 433 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 SLC26A11Q86WA9 606 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 KIAA1958Q8N8K9 716 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 OR52K1Q8NGK4 314 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 OXNAD1Q96HP4 312 aaPredicted RBP20.37■□□□□ 0.85
PNKP-214ENST00000600573 TBL1YQ9BQ87 522 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 PDFQ9HBH1 243 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 DNMT3BQ9UBC3 853 aaKnown RBP20.37■□□□□ 0.85
PNKP-214ENST00000600573 ZNF180Q9UJW8 692 aa20.37■□□□□ 0.85
PNKP-214ENST00000600573 ARHGEF15O94989 841 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 C1QAP02745 245 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 RHOP08100 348 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 MGAT1P26572 445 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 ACVRL1P37023 503 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 SLC10A7Q0GE19 358 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 GPR158Q5T848 1215 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 LRRC6Q86X45 466 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 SHKBP1Q8TBC3 707 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 MZB1Q8WU39 189 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 PTCD2Q8WV60 388 aaKnown RBP20.36■□□□□ 0.85
PNKP-214ENST00000600573 CDKL2Q92772 493 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 CDCA3Q99618 268 aaPredicted RBP20.36■□□□□ 0.85
PNKP-214ENST00000600573 POLR1EQ9GZS1 481 aaKnown RBP20.36■□□□□ 0.85
PNKP-214ENST00000600573 FAM107BQ9H098 131 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 NSRP1Q9H0G5 558 aaKnown RBP20.36■□□□□ 0.85
PNKP-214ENST00000600573 MOCS1Q9NZB8 636 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 CFAP97Q9P2B7 532 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 SEPT3Q9UH03 358 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 ANAPC1Q9H1A4 1944 aa20.36■□□□□ 0.85
PNKP-214ENST00000600573 CXorf51AA0A1B0GTR3 108 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 FAM159BA6NKW6 160 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 H0Y626 953 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 LEFTY2O00292 366 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 TBL1XO60907 577 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 LUC7L3O95232 432 aaKnown RBP20.35■□□□□ 0.85
PNKP-214ENST00000600573 TCF3P15923 654 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms