RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NTAN1Q96AB6 310 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 GLT1D1Q96MS3 346 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 RPRD1AQ96P16 312 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 RBBP8Q99708 897 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 TBL1YQ9BQ87 522 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 GORASP1Q9BQQ3 440 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 SP110Q9HB58 689 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 NMRAL1Q9HBL8 299 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 NEMP2A6NFY4 417 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 GOLGA8CPA6NN73 597 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 J3KR12 359 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 IRAK2O43187 625 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 TRPA1O75762 1119 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 SORBS2O94875 1100 aaKnown RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 SERPINE1P05121 402 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 HLA-DQB2P05538 268 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 GSTA2P09210 222 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 MPSTP25325 297 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 CD86P42081 329 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 RPL34P49207 117 aaKnown RBP11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 GRIK3Q13003 919 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 ACSBG2Q5FVE4 666 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 RALGPS1Q5JS13 557 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 GRTP1Q5TC63 336 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 MBLAC2Q68D91 279 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 C4orf50Q6ZRC1 276 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 FBXO32Q969P5 355 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 EXOC2Q96KP1 924 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 GBP5Q96PP8 586 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 NUF2Q9BZD4 464 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 SAR1AQ9NR31 198 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 OSER1Q9NX31 292 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 GTSE1Q9NYZ3 720 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 WASF2Q9Y6W5 498 aa11.72□□□□□ -0.53
ARHGEF1-220ENST00000600274 ZCWPW2A0A1B0GU75 182 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 SLC12A8A0AV02 714 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 EPHA3P29320 983 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 ARRB2P32121 409 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 CCNFP41002 786 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 RANBP1P43487 201 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 COG7P83436 770 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 RIPK1Q13546 671 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 C6orf163Q5TEZ5 329 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 DCLRE1AQ6PJP8 1040 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 NAPRTQ6XQN6 538 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 ATG14Q6ZNE5 492 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 SNX31Q8N9S9 440 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 ZNF419Q96HQ0 510 aaPredicted RBP11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 C7orf26Q96N11 449 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 TRIM4Q9C037 500 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 BATF3Q9NR55 127 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 ABCC13Q9NSE7 274 aa11.71□□□□□ -0.53
ARHGEF1-220ENST00000600274 OR51F1A6NGY5 319 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 E9PAM4 449 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 AIM2O14862 343 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 NCAM2O15394 837 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 USP1O94782 785 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 PROCP04070 461 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 PTDSS1P48651 473 aaKnown RBP11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 ABCE1P61221 599 aaKnown RBP11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 GALNT2Q10471 571 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 CSHL1Q14406 222 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 PTPRCAPQ14761 206 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 RBBP5Q15291 538 aaKnown RBP11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 TCHHL1Q5QJ38 904 aaPredicted RBP11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 RNF220Q5VTB9 566 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 BHLHA9Q7RTU4 235 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 CCNJLQ8IV13 435 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 SREK1Q8WXA9 508 aaKnown RBP11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 HDAC11Q96DB2 347 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 SLC9A7Q96T83 725 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 IL22Q9GZX6 179 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 HS3ST4Q9Y661 456 aa11.71□□□□□ -0.54
ARHGEF1-220ENST00000600274 ZNF487B1APH4 448 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 RPL17P18621 184 aaKnown RBP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 CNTFP26441 200 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 LIMK2P53671 638 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 KLC1Q07866 573 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 SREBF2Q12772 1141 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 SCD5Q86SK9 330 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 PPHLN1Q8NEY8 458 aaKnown RBP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 RAET1EQ8TD07 263 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 ZNF398Q8TD17 642 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 BLOC1S5Q8TDH9 187 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 PDCD6IPQ8WUM4 868 aaKnown RBP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 PHF21BQ96EK2 531 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 PTCD3Q96EY7 689 aaKnown RBP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 VCXQ9H320 206 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 CATSPERBQ9H7T0 1116 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 TRHDEQ9UKU6 1024 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 ACTL7AQ9Y615 435 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 CCDC189A1A4V9 331 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 UNCXA6NJT0 531 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 NVLO15381 856 aaKnown RBP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 TOMM70O94826 608 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 AHSGP02765 367 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 ATN1P54259 1190 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 TBX4P57082 545 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 DSC2Q02487 901 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 GEN1Q17RS7 908 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms