RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 MAP3K6O95382 1288 aa14□□□□□ -0.17
VRK3-219ENST00000600137 CTSLP07711 333 aa14□□□□□ -0.17
VRK3-219ENST00000600137 NNMTP40261 264 aa14□□□□□ -0.17
VRK3-219ENST00000600137 NRLP54845 237 aa14□□□□□ -0.17
VRK3-219ENST00000600137 RPS14P62263 151 aaKnown RBP14□□□□□ -0.17
VRK3-219ENST00000600137 IL10RBQ08334 325 aa14□□□□□ -0.17
VRK3-219ENST00000600137 SRSF5Q13243 272 aaKnown RBP14□□□□□ -0.17
VRK3-219ENST00000600137 STARD3Q14849 445 aa14□□□□□ -0.17
VRK3-219ENST00000600137 MEI1Q5TIA1 1274 aa14□□□□□ -0.17
VRK3-219ENST00000600137 NPNTQ6UXI9 565 aa14□□□□□ -0.17
VRK3-219ENST00000600137 PLPP6Q8IY26 295 aa14□□□□□ -0.17
VRK3-219ENST00000600137 CHST14Q8NCH0 376 aa14□□□□□ -0.17
VRK3-219ENST00000600137 LRRN4Q8WUT4 740 aa14□□□□□ -0.17
VRK3-219ENST00000600137 ZNF419Q96HQ0 510 aaPredicted RBP14□□□□□ -0.17
VRK3-219ENST00000600137 TSGA13Q96PP4 275 aa14□□□□□ -0.17
VRK3-219ENST00000600137 TPSD1Q9BZJ3 242 aa14□□□□□ -0.17
VRK3-219ENST00000600137 CEP44Q9C0F1 390 aa14□□□□□ -0.17
VRK3-219ENST00000600137 TNKS2Q9H2K2 1166 aa14□□□□□ -0.17
VRK3-219ENST00000600137 PRDM16Q9HAZ2 1276 aa14□□□□□ -0.17
VRK3-219ENST00000600137 ITM2CQ9NQX7 267 aa14□□□□□ -0.17
VRK3-219ENST00000600137 LHX3Q9UBR4 397 aa14□□□□□ -0.17
VRK3-219ENST00000600137 PPM1HQ9ULR3 514 aa14□□□□□ -0.17
VRK3-219ENST00000600137 ARIH1Q9Y4X5 557 aaPredicted RBP14□□□□□ -0.17
VRK3-219ENST00000600137 R4GN57 208 aa14□□□□□ -0.17
VRK3-219ENST00000600137 GPR179Q6PRD1 2367 aa14□□□□□ -0.17
VRK3-219ENST00000600137 SDK1Q7Z5N4 2213 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 USP27XA6NNY8 438 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 MIF4GDA9UHW6 222 aaKnown RBP13.99□□□□□ -0.17
VRK3-219ENST00000600137 MUSKO15146 869 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 ALDH1A2O94788 518 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 TMCC1O94876 653 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 PTPN7P35236 360 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 SERPINB6P35237 376 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 P2RY2P41231 377 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 RGRP47804 291 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 METAP1P53582 386 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 PTPN5P54829 565 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 RWDD2BP57060 319 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 COPS2P61201 443 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 SLC10A7Q0GE19 358 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 PPP2R5EQ16537 467 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 ACCSLQ4AC99 568 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 TFDP3Q5H9I0 405 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 ZFYVE27Q5T4F4 411 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 DPY19L3Q6ZPD9 716 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 PCDH20Q8N6Y1 951 aaKnown RBP13.99□□□□□ -0.17
VRK3-219ENST00000600137 CASKIN2Q8WXE0 1202 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 RLN3Q8WXF3 142 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 SIPA1Q96FS4 1042 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 OLFM3Q96PB7 478 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 TLR10Q9BXR5 811 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 FBRSQ9HAH7 460 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 USP36Q9P275 1121 aaKnown RBP13.99□□□□□ -0.17
VRK3-219ENST00000600137 MBD1Q9UIS9 605 aaPredicted RBP13.99□□□□□ -0.17
VRK3-219ENST00000600137 HPCAL4Q9UM19 191 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 EFR3BQ9Y2G0 817 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 PCDHGA2Q9Y5H1 932 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 WASF2Q9Y6W5 498 aa13.99□□□□□ -0.17
VRK3-219ENST00000600137 SPAG17Q6Q759 2223 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 C10orf142B7Z368 130 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 CST8O60676 142 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 IGLV3-19P01714 112 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 PECAM1P16284 738 aaPredicted RBP13.98□□□□□ -0.17
VRK3-219ENST00000600137 GARSP41250 739 aaKnown RBP13.98□□□□□ -0.17
VRK3-219ENST00000600137 NBL1P41271 181 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 GEMIN4P57678 1058 aaKnown RBP13.98□□□□□ -0.17
VRK3-219ENST00000600137 ELAVL3Q14576 367 aaKnown RBP13.98□□□□□ -0.17
VRK3-219ENST00000600137 CARD16Q5EG05 197 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 BBS12Q6ZW61 710 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 RFX6Q8HWS3 928 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 LRRC49Q8IUZ0 686 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 PGBD5Q8N414 524 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 FAM160A2Q8N612 972 aaPredicted RBP13.98□□□□□ -0.17
VRK3-219ENST00000600137 TEX26Q8N6G2 289 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 UBE2Q2Q8WVN8 375 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 MAML1Q92585 1016 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 FATE1Q969F0 183 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 FAM131CQ96AQ9 280 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 RBM41Q96IZ5 413 aaKnown RBP13.98□□□□□ -0.17
VRK3-219ENST00000600137 ZNF599Q96NL3 588 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 FAM86C1Q9NVL1 165 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 SAE1Q9UBE0 346 aaPredicted RBP13.98□□□□□ -0.17
VRK3-219ENST00000600137 UBA2Q9UBT2 640 aaPredicted RBP13.98□□□□□ -0.17
VRK3-219ENST00000600137 INVSQ9Y283 1065 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.98□□□□□ -0.17
VRK3-219ENST00000600137 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.98□□□□□ -0.17
VRK3-219ENST00000600137 GON4LQ3T8J9 2241 aa13.98□□□□□ -0.17
VRK3-219ENST00000600137 IGHV1OR15-9A0A0B4J2B8 117 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 APOL1O14791 398 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 ALOX15BO15296 676 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 GSRP00390 522 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 BCKDHBP21953 392 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 CCNCP24863 283 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 GKP32189 559 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 CHRNA3P32297 505 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 DRD3P35462 400 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 TPMTP51580 245 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 ZNF211Q13398 564 aaPredicted RBP13.97□□□□□ -0.17
VRK3-219ENST00000600137 IHHQ14623 411 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 CST6Q15828 149 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms