RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 CYLC1P35663 651 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 PDE4CQ08493 712 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 BST2Q10589 180 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 CST6Q15828 149 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 IGFBP7Q16270 282 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 NAPEPLDQ6IQ20 393 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 ACAD10Q6JQN1 1059 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 CLEC20AQ6ZU45 233 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 PTRH1Q86Y79 214 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 SLC25A45Q8N413 288 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 TMEM35BQ8NCS4 154 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 OR4C6Q8NH72 309 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 UBA3Q8TBC4 463 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 SLC2A11Q9BYW1 496 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 DCLK3Q9C098 648 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 ISCUQ9H1K1 167 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 HESX1Q9UBX0 185 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 SCML2Q9UQR0 700 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 CREBBPQ92793 2442 aa14.3□□□□□ -0.12
SHKBP1-218ENST00000598907 HHLA1C9JL84 531 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 TULP2O00295 520 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 XPO1O14980 1071 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 EFSO43281 561 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 RNASEH1O60930 286 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 SIN3BO75182 1162 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 RTN2O75298 545 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 PPFIA2O75334 1257 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 CKMT1AP12532 417 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 MAT2AP31153 395 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 PSMD8P48556 350 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 CCR5P51681 352 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 PTP4A2Q12974 167 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 POM121L1PQ3SYA9 428 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 MBLAC2Q68D91 279 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 ALKBH5Q6P6C2 394 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 KLHDC10Q6PID8 442 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 IGF2-ASQ6U949 168 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 CRTC1Q6UUV9 634 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 ADIPOR2Q86V24 386 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 PHF13Q86YI8 300 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 PASD1Q8IV76 773 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 MMAAQ8IVH4 418 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 C1orf131Q8NDD1 294 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 OR14C36Q8NHC7 312 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 WFIKKN2Q8TEU8 576 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 ARRDC3Q96B67 414 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 SGF29Q96ES7 293 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 SLC4A5Q9BY07 1137 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 EPN3Q9H201 632 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 PDCL3Q9H2J4 239 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 DEF6Q9H4E7 631 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 PNPLA8Q9NP80 782 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 SPTLC3Q9NUV7 552 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 TAS2R14Q9NYV8 317 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 GGA2Q9UJY4 613 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 ATXN7L1Q9ULK2 861 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 CA5BQ9Y2D0 317 aa14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 REXO2Q9Y3B8 237 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-218ENST00000598907 CDRT15L2A8MXV6 281 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 NRDCO43847 1150 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 GABBR2O75899 941 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 TNFSF15O95150 251 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 GJB6O95452 261 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 DLDP09622 509 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 C7P10643 843 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 PABPC1P11940 636 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 MMP8P22894 467 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 GABRB2P47870 512 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 ADPRHP54922 357 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 SFSWAPQ12872 951 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 SKIDA1Q1XH10 827 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 CCDC122Q5T0U0 273 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 NAA35Q5VZE5 725 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 PPP1R2P3Q6NXS1 205 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 PMF1Q6P1K2 205 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 SCD5Q86SK9 330 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 TADA2BQ86TJ2 420 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 TMEM110Q86TL2 294 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 COL27A1Q8IZC6 1860 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 AHI1Q8N157 1196 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 CPXM2Q8N436 756 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 MFSD2AQ8NA29 543 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 IFI44Q8TCB0 444 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 CPA5Q8WXQ8 436 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 KCTD13Q8WZ19 329 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 HSFY1Q96LI6 401 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 APOLD1Q96LR9 279 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 PSMG3-AS1Q96PY0 264 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 MYOCQ99972 504 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 LRRC4CQ9HCJ2 640 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 SUN2Q9UH99 717 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 SCML1Q9UN30 329 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 CEP83Q9Y592 693 aa14.28□□□□□ -0.12
SHKBP1-218ENST00000598907 NYNRINQ9P2P1 1898 aaKnown RBP14.27□□□□□ -0.12
SHKBP1-218ENST00000598907 TBC1D3DA0A087WVF3 549 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 TBC1D3IA0A087WXS9 549 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 TBC1D3EA0A087X179 549 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 TBC1D3KA0A087X1G2 549 aa14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 TBC1D3FA6NER0 549 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-218ENST00000598907 TBC1D3LB9A6J9 549 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms