RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 CPNE8Q86YQ8 564 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 RGL4Q8IZJ4 473 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 HDDC3Q8N4P3 179 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 AADATQ8N5Z0 425 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 PCDH20Q8N6Y1 951 aaKnown RBP14.13□□□□□ -0.15
UPF1-205ENST00000598209 SLC35G2Q8TBE7 412 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 PIP4K2CQ8TBX8 421 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 TCEAL3Q969E4 200 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 PANX2Q96RD6 677 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 KLC2Q9H0B6 622 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 PCED1AQ9H1Q7 454 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 NEUROG2Q9H2A3 272 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 C6orf106Q9H6K1 298 aaPredicted RBP14.13□□□□□ -0.15
UPF1-205ENST00000598209 LRRC19Q9H756 370 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 LCMT1Q9UIC8 334 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 INTUQ9ULD6 942 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 PPM1HQ9ULR3 514 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 FZD4Q9ULV1 537 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 DOCK9Q9BZ29 2069 aa14.13□□□□□ -0.15
UPF1-205ENST00000598209 WDR87Q6ZQQ6 2873 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 ZSCAN5CA6NGD5 496 aaPredicted RBP14.12□□□□□ -0.15
UPF1-205ENST00000598209 TMEM110-MUSTN1A8MSY1 372 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 KHNYNO15037 678 aaKnown RBP14.12□□□□□ -0.15
UPF1-205ENST00000598209 BUB1O43683 1085 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 CTSLP07711 333 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 MAOBP27338 520 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 CHRNA3P32297 505 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 HOXD12P35452 270 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 DRD3P35462 400 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 GJC1P36383 396 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 DNA2P51530 1060 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 DPYSQ14117 519 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 MESDQ14696 234 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 POM121L1PQ3SYA9 428 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 WDR45BQ5MNZ6 344 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 DPY19L3Q6ZPD9 716 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 POLNQ7Z5Q5 900 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 RHOT2Q8IXI1 618 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 CCDC170Q8IYT3 715 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 CHST14Q8NCH0 376 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 RFFLQ8WZ73 363 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 ISG20Q96AZ6 181 aaKnown RBP14.12□□□□□ -0.15
UPF1-205ENST00000598209 CELF6Q96J87 481 aaKnown RBP14.12□□□□□ -0.15
UPF1-205ENST00000598209 TM6SF2Q9BZW4 377 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 SLC39A8Q9C0K1 460 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 PCDH18Q9HCL0 1135 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 PLXNA2O75051 1894 aa14.12□□□□□ -0.15
UPF1-205ENST00000598209 ANKRD36A6QL64 1941 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 TP53BP1Q12888 1972 aaPredicted RBP14.11□□□□□ -0.15
UPF1-205ENST00000598209 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.11□□□□□ -0.15
UPF1-205ENST00000598209 FAM47DPA6NHR8 397 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 ARHGAP42A6NI28 874 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 PRR5-ARHGAP8B1AHC4 643 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 PLK4O00444 970 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 GDF9O60383 454 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 MTA2O94776 668 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 LCA5LO95447 670 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 PRNPP04156 253 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 AMPD1P23109 780 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 MAN1A1P33908 653 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 CYLC1P35663 651 aaPredicted RBP14.11□□□□□ -0.15
UPF1-205ENST00000598209 MAGEA1P43355 309 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 CCNHP51946 323 aaPredicted RBP14.11□□□□□ -0.15
UPF1-205ENST00000598209 CDH6P55285 790 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 TAS2R40P59535 323 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 ARHGAP8P85298 464 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 KRT81Q14533 505 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 DUOXA1Q1HG43 343 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 TRIM61Q5EBN2 209 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 CARD16Q5EG05 197 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 AFMIDQ63HM1 303 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.11□□□□□ -0.15
UPF1-205ENST00000598209 NPWQ8N729 165 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 NETO2Q8NC67 525 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 TMIEQ8NEW7 156 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 DNASE2BQ8WZ79 361 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 SNX19Q92543 992 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 CSPG4P5Q96PW8 444 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 RXFP3Q9NSD7 469 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 IL36AQ9UHA7 158 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 EVLQ9UI08 416 aaPredicted RBP14.11□□□□□ -0.15
UPF1-205ENST00000598209 PCDH15Q96QU1 1955 aa14.11□□□□□ -0.15
UPF1-205ENST00000598209 SOWAHDA6NJG2 315 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 LRRC72A6NJI9 287 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 KPNA3O00505 521 aaPredicted RBP14.1□□□□□ -0.15
UPF1-205ENST00000598209 TMCC1O94876 653 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 GSRP00390 522 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 CFIP05156 583 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 FECHP22830 423 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 CDC25BP30305 580 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 ARHGAP25P42331 645 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 PAPOLAP51003 745 aaKnown RBP14.1□□□□□ -0.15
UPF1-205ENST00000598209 ADPRHP54922 357 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 SNRPD1P62314 119 aaKnown RBP14.1□□□□□ -0.15
UPF1-205ENST00000598209 IRX4P78413 519 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 CNTN1Q12860 1018 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 SPA17Q15506 151 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 RSPO4Q2I0M5 234 aaPredicted RBP14.1□□□□□ -0.15
UPF1-205ENST00000598209 ATP13A4Q4VNC1 1196 aa14.1□□□□□ -0.15
UPF1-205ENST00000598209 INO80DQ53TQ3 878 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms