RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	AK5	Q9Y6K8	562 aa		10.77	□□□□□ -0.69
LSM4-205	ENST00000597776	FASN	P49327	2511 aa	Known RBP	10.77	□□□□□ -0.69
LSM4-205	ENST00000597776	IGLV3-10	A0A075B6K4	115 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	FFAR2	O15552	330 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	TLX3	O43711	291 aa	Predicted RBP	10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	ZNF821	O75541	412 aa	Predicted RBP	10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	LEFTY1	O75610	366 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	PCDH8	O95206	1070 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	F9	P00740	461 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	PRNP	P04156	253 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	MME	P08473	750 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	CDK4	P11802	303 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	DGKA	P23743	735 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	ITPKB	P27987	946 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	AKT2	P31751	481 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	CLCN6	P51797	869 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	INSM1	Q01101	510 aa	Predicted RBP	10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	RAB6C	Q53S08	254 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	KLHDC7A	Q5VTJ3	777 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	NAA35	Q5VZE5	725 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	GCNT7	Q6ZNI0	430 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	DPY19L3	Q6ZPD9	716 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	ERN2	Q76MJ5	926 aa	Known RBP	10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	FAM114A1	Q8IWE2	563 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	DRC7	Q8IY82	874 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	TMIE	Q8NEW7	156 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	CPA5	Q8WXQ8	436 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	C1orf74	Q96LT6	269 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	NAA15	Q9BXJ9	866 aa	Known RBP	10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	CALN1	Q9BXU9	219 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	RAB6C	Q9H0N0	254 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	CLSTN2	Q9H4D0	955 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	ZNF212	Q9UDV6	495 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	IL36A	Q9UHA7	158 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	PAXBP1	Q9Y5B6	917 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	ACTL7A	Q9Y615	435 aa		10.76	□□□□□ -0.69
LSM4-205	ENST00000597776	ARID1B	Q8NFD5	2236 aa	Predicted RBP	10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	ILVBL	A1L0T0	632 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776		F8VZ95	297 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	ZMPSTE24	O75844	475 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	LSM8	O95777	96 aa	Known RBP	10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	MYF5	P13349	255 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	UCHL3	P15374	230 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	HNRNPA2B1	P22626	353 aa	Known RBP	10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	ACP1	P24666	158 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	SCNN1A	P37088	669 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	ABCG1	P45844	678 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	RECQL	P46063	649 aa	Predicted RBP	10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	SERPINH1	P50454	418 aa	Known RBP	10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	DNA2	P51530	1060 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	NOMO3	P69849	1222 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	ARF5	P84085	180 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	ATP11A	P98196	1134 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	ZNF211	Q13398	564 aa	Predicted RBP	10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	ILK	Q13418	452 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	FGL2	Q14314	439 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	TMEM259	Q4ZIN3	620 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	ZNF542P	Q5EBM4	170 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	SMYD5	Q6GMV2	418 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	NEK5	Q6P3R8	708 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	TMC6	Q7Z403	805 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	BNIPL	Q7Z465	357 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	PTAR1	Q7Z6K3	402 aa	Predicted RBP	10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	PHLDB2	Q86SQ0	1253 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	SLC22A18AS	Q8N1D0	253 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	EMC1	Q8N766	993 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	EPS8L1	Q8TE68	723 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	SLC20A1	Q8WUM9	679 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	HAPLN3	Q96S86	360 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	HDAC8	Q9BY41	377 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	ZYG11B	Q9C0D3	744 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	ATP13A1	Q9HD20	1204 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	METTL5	Q9NRN9	209 aa	Known RBP	10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	SAMSN1	Q9NSI8	373 aa	Known RBP	10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	KLHL11	Q9NVR0	708 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	TMEM59L	Q9UK28	342 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	FCF1	Q9Y324	198 aa	Known RBP	10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	WASF2	Q9Y6W5	498 aa		10.75	□□□□□ -0.69
LSM4-205	ENST00000597776	MYLK	Q15746	1914 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	RAD51B	O15315	384 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	BRINP1	O60477	761 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	PIAS2	O75928	621 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	GJB6	O95452	261 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	GIMD1	P0DJR0	217 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	ADRB3	P13945	408 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	GK	P32189	559 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	ACVRL1	P37023	503 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	EIF2S3	P41091	472 aa	Known RBP	10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	CCNH	P51946	323 aa	Predicted RBP	10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	NEK3	P51956	506 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	DAB2	P98082	770 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	GNA12	Q03113	381 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	CCDC15	Q0P6D6	951 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	RTP5	Q14D33	572 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	CDO1	Q16878	200 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	RETSAT	Q6NUM9	610 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	KDM7A	Q6ZMT4	941 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776		Q6ZSR6	202 aa		10.74	□□□□□ -0.69
LSM4-205	ENST00000597776	PARS2	Q7L3T8	475 aa	Known RBP	10.74	□□□□□ -0.69

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