RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 F5H423 210 aaPredicted RBP14.92□□□□□ -0.02
VRK3-212ENST00000596814 NFKB1P19838 968 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 ECHS1P30084 290 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 CD68P34810 354 aaPredicted RBP14.92□□□□□ -0.02
VRK3-212ENST00000596814 DGKGP49619 791 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 PLTPP55058 493 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 DMC1Q14565 340 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 MORF4L2Q15014 288 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 PARP6Q2NL67 630 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 GAB4Q2WGN9 574 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 RNASEH2BQ5TBB1 312 aaKnown RBP14.92□□□□□ -0.02
VRK3-212ENST00000596814 ZDHHC24Q6UX98 284 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 CCNI2Q6ZMN8 369 aaPredicted RBP14.92□□□□□ -0.02
VRK3-212ENST00000596814 ETFBKMTQ8IXQ9 262 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 PPIL6Q8IXY8 311 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 AHI1Q8N157 1196 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 PLCD3Q8N3E9 789 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 FBXO25Q8TCJ0 367 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 CPT1BQ92523 772 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 ART4Q93070 314 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 NEUROG2Q9H2A3 272 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 BRD9Q9H8M2 597 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 ETNK1Q9HBU6 452 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 NT5MQ9NPB1 228 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 GTSE1Q9NYZ3 720 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 SEPT3Q9UH03 358 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 ANAPC5Q9UJX4 755 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 SHOC2Q9UQ13 582 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 FARP1Q9Y4F1 1045 aaPredicted RBP14.92□□□□□ -0.02
VRK3-212ENST00000596814 ACTL7AQ9Y615 435 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 TULP3O75386 442 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 MYBL2P10244 700 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 GEMIN4P57678 1058 aaKnown RBP14.92□□□□□ -0.02
VRK3-212ENST00000596814 CAV1Q03135 178 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 SEMA5AQ13591 1074 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 PTCRAQ6ISU1 281 aaPredicted RBP14.92□□□□□ -0.02
VRK3-212ENST00000596814 RETSATQ6NUM9 610 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 HIBCHQ6NVY1 386 aaPredicted RBP14.92□□□□□ -0.02
VRK3-212ENST00000596814 LINGO4Q6UY18 593 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 HOOK3Q86VS8 718 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 EXOC4Q96A65 974 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 CINPQ9BW66 212 aaPredicted RBP14.92□□□□□ -0.02
VRK3-212ENST00000596814 GLOD4Q9HC38 313 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 ZDHHC18Q9NUE0 388 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 FAM50BQ9Y247 325 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 ATP8A1Q9Y2Q0 1164 aa14.92□□□□□ -0.02
VRK3-212ENST00000596814 CCDC151A5D8V7 595 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 E7EVH7 732 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 ARNTLO00327 626 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 TRIM24O15164 1050 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 TP73O15350 636 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 TMCC1O94876 653 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 CISD3P0C7P0 127 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 KCNJ11Q14654 390 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 BRD3Q15059 726 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 AAK1Q2M2I8 961 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 ITPRIPL2Q3MIP1 535 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 PUS10Q3MIT2 529 aaKnown RBP14.91□□□□□ -0.02
VRK3-212ENST00000596814 GRAMD4Q6IC98 578 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 KIAA0907Q7Z7F0 614 aaPredicted RBP14.91□□□□□ -0.02
VRK3-212ENST00000596814 NAT8LQ8N9F0 302 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 TTC8Q8TAM2 541 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 WFIKKN2Q8TEU8 576 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 NXPE3Q969Y0 559 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 FMO2Q99518 471 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 DEC1Q9P2X7 70 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 MTRF1LQ9UGC7 380 aaKnown RBP14.91□□□□□ -0.02
VRK3-212ENST00000596814 SLC27A6Q9Y2P4 619 aa14.91□□□□□ -0.02
VRK3-212ENST00000596814 CXorf51AA0A1B0GTR3 108 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 SMAPO00193 183 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 ERLIN1O75477 346 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 CD160O95971 181 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 APRTP07741 180 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 GJA4P35212 333 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 MAGEA6P43360 314 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 LMAN1P49257 510 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 SERPINH1P50454 418 aaKnown RBP14.9□□□□□ -0.02
VRK3-212ENST00000596814 MAXP61244 160 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 SULT2A1Q06520 285 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 PRPSAP1Q14558 356 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 GEN1Q17RS7 908 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 MAP9Q49MG5 647 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 INO80DQ53TQ3 878 aaPredicted RBP14.9□□□□□ -0.02
VRK3-212ENST00000596814 ANKRD22Q5VYY1 191 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 MBLAC2Q68D91 279 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 ADIPOR2Q86V24 386 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 MAFAQ8NHW3 353 aaPredicted RBP14.9□□□□□ -0.02
VRK3-212ENST00000596814 CSGALNACT1Q8TDX6 532 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.9□□□□□ -0.02
VRK3-212ENST00000596814 PRCCQ92733 491 aaPredicted RBP14.9□□□□□ -0.02
VRK3-212ENST00000596814 PPP1R2P1Q96PQ5 205 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 PSKH2Q96QS6 385 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 FCRL5Q96RD9 977 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 MGME1Q9BQP7 344 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 POLR1EQ9GZS1 481 aaKnown RBP14.9□□□□□ -0.02
VRK3-212ENST00000596814 ARGLU1Q9NWB6 273 aaPredicted RBP14.9□□□□□ -0.02
VRK3-212ENST00000596814 SLC25A13Q9UJS0 675 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 COL4A2P08572 1712 aa14.9□□□□□ -0.02
VRK3-212ENST00000596814 TCRBV7S3A2A0A539 114 aa14.89□□□□□ -0.03
VRK3-212ENST00000596814 GOLGA6CA6NDK9 693 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms