RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ZNF542PQ5EBM4 170 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 ERN2Q76MJ5 926 aaKnown RBP10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 TFAP2DQ7Z6R9 452 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 SETD3Q86TU7 594 aaPredicted RBP10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 SLC47A2Q86VL8 602 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 ZDHHC17Q8IUH5 632 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 DCBLD1Q8N8Z6 715 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 OR7D4Q8NG98 312 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 SNIP1Q8TAD8 396 aaKnown RBP10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 GRIN3AQ8TCU5 1115 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 PPP1R16AQ96I34 528 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 NPY6RQ99463 290 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 SPON2Q9BUD6 331 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 OSBPL2Q9H1P3 480 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 TNKS2Q9H2K2 1166 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 ANLNQ9NQW6 1124 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 ZFR2Q9UPR6 939 aaKnown RBP10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 PAXBP1Q9Y5B6 917 aa10.8□□□□□ -0.68
CHMP2A-202ENST00000596708 IGSF10Q6WRI0 2623 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 GTPBP10A4D1E9 387 aaKnown RBP10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 NEMP2A6NFY4 417 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 DRGXA6NNA5 263 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 A6NNZ2 444 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 TK2O00142 265 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 RNF103O00237 685 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 ATXN7O15265 892 aaPredicted RBP10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 LEFTY1O75610 366 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 PAK4O96013 591 aaPredicted RBP10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 PNMA6AP0CW24 399 aaPredicted RBP10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 MYF5P13349 255 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 DUSP3P51452 185 aaPredicted RBP10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 BPIFB4P59827 614 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 CXADRP78310 365 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 TBC1D25Q3MII6 688 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 FAM102AQ5T9C2 384 aaPredicted RBP10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 OTUD1Q5VV17 481 aaPredicted RBP10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 SEL1L3Q68CR1 1132 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 RETSATQ6NUM9 610 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 C22orf39Q6P5X5 142 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 DPY19L3Q6ZPD9 716 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 Q6ZSR6 202 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 GPR155Q7Z3F1 870 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 PTAR1Q7Z6K3 402 aaPredicted RBP10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 DCP2Q8IU60 420 aaKnown RBP10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 DCAF4L2Q8NA75 395 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 TMEM35BQ8NCS4 154 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 FAM174AQ8TBP5 190 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 C18orf8Q96DM3 657 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 NAF1Q96HR8 494 aaKnown RBP10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 FEM1CQ96JP0 617 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 APOLD1Q96LR9 279 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 C1orf74Q96LT6 269 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 TBCBQ99426 244 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 LGMNQ99538 433 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 SLC17A9Q9BYT1 436 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 ABCG4Q9H172 646 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 CAAP1Q9H8G2 361 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 TMPRSS4Q9NRS4 437 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 EVA1BQ9NVM1 165 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 DNAJC28Q9NX36 388 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 IPO11Q9UI26 975 aaKnown RBP10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 AJAP1Q9UKB5 411 aaPredicted RBP10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 PCDHB1Q9Y5F3 818 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 HS3ST3A1Q9Y663 406 aa10.79□□□□□ -0.68
CHMP2A-202ENST00000596708 SMG1Q96Q15 3661 aaKnown RBP10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 GOLGA8SH3BPF8 625 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 I6L893 689 aaPredicted RBP10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 ZIC2O95409 532 aaPredicted RBP10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 MPOP05164 745 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 CKMT1AP12532 417 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 NEK3P51956 506 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 HNRNPKP61978 463 aaKnown RBP eCLIP10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 RPS21P63220 83 aaKnown RBP10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 RAPGEF1Q13905 1077 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 CAMK4Q16566 473 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 SLC25A52Q3SY17 297 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 ACBD5Q5T8D3 534 aaPredicted RBP10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 GCNT7Q6ZNI0 430 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 ABI3BPQ7Z7G0 1075 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 ERICH1Q86X53 443 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 SPACA3Q8IXA5 215 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 ZNF683Q8IZ20 524 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 LSMEM2Q8N112 164 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 PGAP3Q96FM1 320 aaPredicted RBP10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 IFT43Q96FT9 208 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 BMFQ96LC9 184 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 DEPDC7Q96QD5 511 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 HEPHQ9BQS7 1158 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 DUSP23Q9BVJ7 150 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 HDAC8Q9BY41 377 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 ATP13A1Q9HD20 1204 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 SIX2Q9NPC8 291 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 NLGN3Q9NZ94 848 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 KIAA1468Q9P260 1216 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 WASF2Q9Y6W5 498 aa10.78□□□□□ -0.68
CHMP2A-202ENST00000596708 COL6A6A6NMZ7 2263 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 TEX51A0A1B0GUA7 166 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 ILVBLA1L0T0 632 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 POM121BA6NF01 834 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 H3BM21 787 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms