RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 GKP32189 559 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 HTR7P34969 479 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 PAPOLAP51003 745 aaKnown RBP11.37□□□□□ -0.59
VRK3-210ENST00000596121 CLCN6P51797 869 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 YBEYP58557 167 aaPredicted RBP11.37□□□□□ -0.59
VRK3-210ENST00000596121 SLC20A2Q08357 652 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 MESDQ14696 234 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 CYTH1Q15438 398 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 PEAR1Q5VY43 1037 aaPredicted RBP11.37□□□□□ -0.59
VRK3-210ENST00000596121 PRR23CQ6ZRP0 262 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 USP30Q70CQ3 517 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 CYP2U1Q7Z449 544 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 SPC24Q8NBT2 197 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 C1orf216Q8TAB5 229 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 PIP4K2CQ8TBX8 421 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 TEKT4Q8WW24 435 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 OR8D1Q8WZ84 308 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 ARRDC3Q96B67 414 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 CSPG4P5Q96PW8 444 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 EIF3CQ99613 913 aaKnown RBP11.37□□□□□ -0.59
VRK3-210ENST00000596121 NCAPGQ9BPX3 1015 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 ORAI3Q9BRQ5 295 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 EBF2Q9HAK2 575 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 PDFQ9HBH1 243 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 FSCN3Q9NQT6 498 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 VPS45Q9NRW7 570 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 KLHL11Q9NVR0 708 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 SALL4Q9UJQ4 1053 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 HYOU1Q9Y4L1 999 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 PCDHA13Q9Y5I0 950 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 CEP192Q8TEP8 1941 aa11.37□□□□□ -0.59
VRK3-210ENST00000596121 DNAH14Q0VDD8 3507 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 CXorf51AA0A1B0GTR3 108 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 ALOX15BO15296 676 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 DAPK3O43293 454 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 BUB1O43683 1085 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 RNASEH1O60930 286 aaKnown RBP11.36□□□□□ -0.59
VRK3-210ENST00000596121 RNASEH2AO75792 299 aaKnown RBP11.36□□□□□ -0.59
VRK3-210ENST00000596121 TMCC1O94876 653 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 C5AR1P21730 350 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 CHRNA3P32297 505 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 ETFBP38117 255 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 SSR1P43307 286 aaKnown RBP11.36□□□□□ -0.59
VRK3-210ENST00000596121 MAGEA1P43355 309 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 DNA2P51530 1060 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 NDST2P52849 883 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 TAS2R38P59533 333 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 IRX4P78413 519 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 CNTN1Q12860 1018 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 DPYSL3Q14195 570 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 PARP15Q460N3 678 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 CARD16Q5EG05 197 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 ARSIQ5FYB1 569 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 ATXN7L2Q5T6C5 722 aaPredicted RBP11.36□□□□□ -0.59
VRK3-210ENST00000596121 DCAF12L1Q5VU92 463 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.36□□□□□ -0.59
VRK3-210ENST00000596121 SYT12Q8IV01 421 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 CCDC170Q8IYT3 715 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 HDDC3Q8N4P3 179 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 CADM4Q8NFZ8 388 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 OR6K2Q8NGY2 324 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 GANCQ8TET4 914 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 RFFLQ8WZ73 363 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 DNASE2BQ8WZ79 361 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 TM6SF2Q9BZW4 377 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 CEP44Q9C0F1 390 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 BTBD1Q9H0C5 482 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 INTUQ9ULD6 942 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 SCML1Q9UN30 329 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 EPN1Q9Y6I3 576 aaPredicted RBP11.36□□□□□ -0.59
VRK3-210ENST00000596121 KNL1Q8NG31 2342 aa11.36□□□□□ -0.59
VRK3-210ENST00000596121 NYNRINQ9P2P1 1898 aaKnown RBP11.36□□□□□ -0.59
VRK3-210ENST00000596121 A0A0U1RQJ8 604 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 H3BRJ5 948 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 INSIG1O15503 277 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 PRAMEF11O60813 436 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 NDUFA10O95299 355 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 SEMA4FO95754 770 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 ADH1BP00325 375 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 IGHV4-34P06331 123 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 MAN1A1P33908 653 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 GJC1P36383 396 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 CCNHP51946 323 aaPredicted RBP11.35□□□□□ -0.59
VRK3-210ENST00000596121 CDH6P55285 790 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 TTC31Q49AM3 519 aaPredicted RBP11.35□□□□□ -0.59
VRK3-210ENST00000596121 PIP5KL1Q5T9C9 394 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 AGBL4Q5VU57 503 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 NCEH1Q6PIU2 408 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 TMTC1Q8IUR5 882 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 PCDH20Q8N6Y1 951 aaKnown RBP11.35□□□□□ -0.59
VRK3-210ENST00000596121 TMIEQ8NEW7 156 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 PCDH19Q8TAB3 1148 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 GRIN3AQ8TCU5 1115 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 RAPGEF5Q92565 580 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 ISG20Q96AZ6 181 aaKnown RBP11.35□□□□□ -0.59
VRK3-210ENST00000596121 BIRC7Q96CA5 298 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 RMDN1Q96DB5 314 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 NSMCE3Q96MG7 304 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 OMDQ99983 421 aa11.35□□□□□ -0.59
VRK3-210ENST00000596121 GOLPH3Q9H4A6 298 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms