RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 ADH5P11766 374 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 HLA-FP30511 346 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 MMP13P45452 471 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 BASP1P80723 227 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 ARF5P84085 180 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 GAD2Q05329 585 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 RFTN1Q14699 578 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 LBRQ14739 615 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 FAXCQ5TGI0 409 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 MARC1Q5VT66 337 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 KCTD11Q693B1 232 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 ALG1LQ6GMV1 187 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 MTSS1LQ765P7 747 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 ZNF354CQ86Y25 554 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 PGBD5Q8N414 524 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 ZCCHC9Q8N567 271 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 MCUQ8NE86 351 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 NSMCE1Q8WV22 266 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 ATP2A3Q93084 1043 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 ZFYVE19Q96K21 471 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 AGAP3Q96P47 875 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 FCRL5Q96RD9 977 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 MLPHQ9BV36 600 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 MTRF1LQ9UGC7 380 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 RSPH14Q9UHP6 348 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 VPS28Q9UK41 221 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 HPCAL4Q9UM19 191 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 MYLKQ15746 1914 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 CBX4O00257 560 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 PSMC3P17980 439 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 CDK16Q00536 496 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 HTR4Q13639 388 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 DMC1Q14565 340 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 CYTH1Q15438 398 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 INO80DQ53TQ3 878 aaPredicted RBP15□□□□□ -0.01
SHKBP1-211ENST00000595945 PITRM1Q5JRX3 1037 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 ETFBKMTQ8IXQ9 262 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 MREGQ8N565 214 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 ST13P5Q8NFI4 369 aaPredicted RBP15□□□□□ -0.01
SHKBP1-211ENST00000595945 ACDQ96AP0 544 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 KXD1Q9BQD3 176 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 C2orf49Q9BVC5 232 aaPredicted RBP15□□□□□ -0.01
SHKBP1-211ENST00000595945 PHACTR1Q9C0D0 580 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 SLC25A51Q9H1U9 297 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 EBF3Q9H4W6 596 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 ECT2Q9H8V3 914 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 NT5MQ9NPB1 228 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 ABCB8Q9NUT2 735 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 GGA2Q9UJY4 613 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 ACTL7AQ9Y615 435 aa15□□□□□ -0.01
SHKBP1-211ENST00000595945 C5orf42Q9H799 3197 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 MUC22E2RYF6 1773 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 OTOL1A6NHN0 477 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 ERI2A8K979 691 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 E7ESA3 106 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 MUSKO15146 869 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 PPFIA2O75334 1257 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 SUN1O94901 812 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 PABPC1P11940 636 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 KCNA5P22460 613 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 HSPA9P38646 679 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 NIPAL4Q0D2K0 466 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 GRM2Q14416 872 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 CCDC85BQ15834 202 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 FUT11Q495W5 492 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 LEKR1Q6ZMV7 388 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 ZNF534Q76KX8 674 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 TMC3Q7Z5M5 1100 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 C12orf40Q86WS4 652 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 ARRDC2Q8TBH0 407 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 TTC17Q96AE7 1141 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 TADA1Q96BN2 335 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 IMP4Q96G21 291 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 OXNAD1Q96HP4 312 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 PWWP2AQ96N64 755 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 PSKH2Q96QS6 385 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 MGME1Q9BQP7 344 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 RPP25Q9BUL9 199 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 FRMD8Q9BZ67 464 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 ARFGAP3Q9NP61 516 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 SEPT3Q9UH03 358 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 SLC27A6Q9Y2P4 619 aa14.99□□□□□ -0.01
SHKBP1-211ENST00000595945 SZT2Q5T011 3432 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 F5H423 210 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 ARNTLO00327 626 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 PSMD3O43242 534 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 TMCC1O94876 653 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 AP2A1O95782 977 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 APRTP07741 180 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 MMP2P08253 660 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 FOSL2P15408 326 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 CR2P20023 1033 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 MAGEA3P43357 314 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 NUMBP49757 651 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 SLC20A2Q08357 652 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 ZNF235Q14590 738 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 IHHQ14623 411 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 SLC14A2Q15849 920 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 HABP4Q5JVS0 413 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 RETSATQ6NUM9 610 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms