RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CELSR2Q9HCU4 2923 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 CNGB3Q9NQW8 809 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 GEMIN8Q9NWZ8 242 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 KCNK4Q9NYG8 393 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 NYNRINQ9P2P1 1898 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 SPTBN1Q01082 2364 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 C1QTNF3-AMACRE9PGA6 284 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 PSMA7O14818 248 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 MCF2LO15068 1137 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 RAD51BO15315 384 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 AQP9O43315 295 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 PCDH8O95206 1070 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 FYNP06241 537 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 CTSLP07711 333 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 NME1P15531 152 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 FKBP3Q00688 224 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 SERINC3Q13530 473 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 C1orf61Q13536 156 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 STIM1Q13586 685 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 MORC3Q14149 939 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 SPIDRQ14159 915 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 CRYBG3Q68DQ2 2970 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 SLC35F3Q8IY50 421 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 CCDC150Q8NCX0 1101 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 KCTD13Q8WZ19 329 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 PPP1R13BQ96KQ4 1090 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 CCDC3Q9BQI4 270 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 TCEAL2Q9H3H9 227 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 HESX1Q9UBX0 185 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 SALL4Q9UJQ4 1053 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 PCDHGA7Q9Y5G6 932 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 CSNK1G3Q9Y6M4 447 aa14.1□□□□□ -0.15
SHKBP1-208ENST00000595726 SPENQ96T58 3664 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 SPTY2D1-AS1A0A0U1RR47 76 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 A6NNZ2 444 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 KPNA3O00505 521 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 ATP9BO43861 1147 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 GCATO75600 419 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 PAK4O96013 591 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 LTFP02788 710 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 CD19P15391 556 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 JUNDP17535 347 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 GTF2H1P32780 548 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 PPP1R2P41236 205 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 MXI1P50539 228 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 MAPK8IP2Q13387 824 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 FGL2Q14314 439 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 MANEAQ5SRI9 462 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 KRT39Q6A163 491 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 PMF1Q6P1K2 205 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 NEK5Q6P3R8 708 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 ZFAND4Q86XD8 727 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 RBFAQ8N0V3 343 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 OR52K2Q8NGK3 314 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 DQX1Q8TE96 717 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 SLC39A13Q96H72 371 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 DHTKD1Q96HY7 919 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 IL12RB2Q99665 862 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 FUCA2Q9BTY2 467 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 MIS12Q9H081 205 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 NCKIPSDQ9NZQ3 722 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 NAALADL1Q9UQQ1 740 aa14.09□□□□□ -0.15
SHKBP1-208ENST00000595726 PPP1R3GB7ZBB8 358 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 BIN1O00499 593 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 SPINT1O43278 529 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 LIPCP11150 499 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 TACR2P21452 398 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 ADKP55263 362 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 ZC3H12AQ5D1E8 599 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 DCAF17Q5H9S7 520 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 CHSY1Q86X52 802 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 DCP2Q8IU60 420 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 CCAR2Q8N163 923 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 SCML4Q8N228 414 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 ZNF564Q8TBZ8 553 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 ALG14Q96F25 216 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 LIN37Q96GY3 246 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 BOCQ9BWV1 1114 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 GPR27Q9NS67 375 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 PISDQ9UG56 409 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 IPO11Q9UI26 975 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 RABGEF1Q9UJ41 708 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 TLR6Q9Y2C9 796 aa14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 ZFC3H1O60293 1989 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-208ENST00000595726 ABCA12Q86UK0 2595 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 O00370 1275 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 NTN3O00634 580 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 STX10O60499 249 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 MT-CO1P00395 513 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 CALCAP01258 141 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 ITIH1P19827 911 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 PLK1P53350 603 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 SULT2A1Q06520 285 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 EIF2B5Q13144 721 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 SLC12A1Q13621 1099 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 PDE1CQ14123 709 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 CBWD6Q4V339 395 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 TMEM259Q4ZIN3 620 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 CBWD3Q5JTY5 395 aa14.07□□□□□ -0.16
SHKBP1-208ENST00000595726 CBWD5Q5RIA9 395 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms