RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 CLEC1BQ9P126 229 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 TBC1D14Q9P2M4 693 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 AP2A1O95782 977 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 CYBBP04839 570 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 MMP13P45452 471 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 LBRQ14739 615 aaKnown RBP15.45■□□□□ 0.06
VRK3-207ENST00000594092 FAM78AQ5JUQ0 283 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 TMCO4Q5TGY1 634 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 KCTD11Q693B1 232 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 TMEM25Q86YD3 366 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 KLHDC8BQ8IXV7 354 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.45■□□□□ 0.06
VRK3-207ENST00000594092 OXNAD1Q96HP4 312 aaPredicted RBP15.45■□□□□ 0.06
VRK3-207ENST00000594092 ATP6V1G3Q96LB4 118 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 ASB16Q96NS5 453 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 FEM1AQ9BSK4 669 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 XAB2Q9HCS7 855 aaKnown RBP15.45■□□□□ 0.06
VRK3-207ENST00000594092 NT5MQ9NPB1 228 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 CLEC4EQ9ULY5 219 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 OR51B4Q9Y5P0 310 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 WNT6Q9Y6F9 365 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 SZT2Q5T011 3432 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 ERI2A8K979 691 aaKnown RBP15.45■□□□□ 0.06
VRK3-207ENST00000594092 HMGB1P1B2RPK0 211 aaPredicted RBP15.45■□□□□ 0.06
VRK3-207ENST00000594092 SUN1O94901 812 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 ABHD2P08910 425 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 CSKP41240 450 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 VIPR2P41587 438 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 MAGEA3P43357 314 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 SARNPP82979 210 aaKnown RBP15.45■□□□□ 0.06
VRK3-207ENST00000594092 SPARCL1Q14515 664 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 PRPSAP1Q14558 356 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 GRIN2CQ14957 1233 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 ANKMY2Q8IV38 441 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 AGGF1Q8N302 714 aaeCLIP15.45■□□□□ 0.06
VRK3-207ENST00000594092 SPATA22Q8NHS9 363 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 SMARCD2Q92925 531 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 OTUB2Q96DC9 234 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 ALG14Q96F25 216 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 TMEM109Q9BVC6 243 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 ROPN1BQ9BZX4 212 aaPredicted RBP15.45■□□□□ 0.06
VRK3-207ENST00000594092 ROPN1Q9HAT0 212 aaPredicted RBP15.45■□□□□ 0.06
VRK3-207ENST00000594092 SPHK2Q9NRA0 654 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 GDE1Q9NZC3 331 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 UBP1Q9NZI7 540 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 ACTL7AQ9Y615 435 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 MTCH2Q9Y6C9 303 aa15.45■□□□□ 0.06
VRK3-207ENST00000594092 A0A1W2PPC1 479 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 CBX4O00257 560 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 TBX10O75333 385 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 PENKP01210 267 aaPredicted RBP15.44■□□□□ 0.06
VRK3-207ENST00000594092 DLX2Q07687 328 aaPredicted RBP15.44■□□□□ 0.06
VRK3-207ENST00000594092 OLIG2Q13516 323 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 CTC1Q2NKJ3 1217 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 LRRC8BQ6P9F7 803 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 PGBD5Q8N414 524 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 FIBINQ8TAL6 211 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 PYROXD1Q8WU10 500 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 IRF7Q92985 503 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 CCDC77Q9BR77 488 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 SLC25A51Q9H1U9 297 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 S1PR5Q9H228 398 aa15.44■□□□□ 0.06
VRK3-207ENST00000594092 UBA2Q9UBT2 640 aaPredicted RBP15.44■□□□□ 0.06
VRK3-207ENST00000594092 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.44■□□□□ 0.06
VRK3-207ENST00000594092 TRIOBPQ9H2D6 2365 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 TMEM265A0A087WTH1 108 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 A0A087WUV0 522 aaPredicted RBP15.43■□□□□ 0.06
VRK3-207ENST00000594092 SLC9A3R1O14745 358 aaPredicted RBP15.43■□□□□ 0.06
VRK3-207ENST00000594092 SNAP91O60641 907 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 ZMPSTE24O75844 475 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 ANXA9O76027 345 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 MT-CYBP00156 380 aaPredicted RBP15.43■□□□□ 0.06
VRK3-207ENST00000594092 MLNP12872 115 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 ELK3P41970 407 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 MAXP61244 160 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 ARF5P84085 180 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 LMAN2Q12907 356 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 DNAJC21Q5F1R6 531 aaKnown RBP15.43■□□□□ 0.06
VRK3-207ENST00000594092 AGBL2Q5U5Z8 902 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 KCTD16Q68DU8 428 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 IGDCC3Q8IVU1 814 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 CCDC117Q8IWD4 279 aaPredicted RBP15.43■□□□□ 0.06
VRK3-207ENST00000594092 ADGRG2Q8IZP9 1017 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 KIAA1958Q8N8K9 716 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 FBXO36Q8NEA4 188 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 FAM76AQ8TAV0 307 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 BCCIPQ9P287 314 aaKnown RBP eCLIP15.43■□□□□ 0.06
VRK3-207ENST00000594092 VPS28Q9UK41 221 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 AAR2Q9Y312 384 aaKnown RBP15.43■□□□□ 0.06
VRK3-207ENST00000594092 TEX264Q9Y6I9 313 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 MYOFQ9NZM1 2061 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 TLDC2A0PJX2 215 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 RASGRF2O14827 1237 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 MUSKO15146 869 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 PSMD3O43242 534 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 IVLP07476 585 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 GEMP55040 296 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 ITKQ08881 620 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 NIPAL4Q0D2K0 466 aa15.43■□□□□ 0.06
VRK3-207ENST00000594092 ADGRE1Q14246 886 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms