RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 KLK6Q92876 244 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 HAPLN3Q96S86 360 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 MYOCQ99972 504 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 ZNF212Q9UDV6 495 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 IL36AQ9UHA7 158 aa24.45■■□□□ 1.5
LSM4-202ENST00000593564 RNF103O00237 685 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 TRIM38O00635 465 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 SIGLEC6O43699 453 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 GLDCP23378 1020 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 RECQLP46063 649 aaPredicted RBP24.44■■□□□ 1.5
LSM4-202ENST00000593564 ARSIQ5FYB1 569 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 TAF3Q5VWG9 929 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 TRNP1Q6NT89 227 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 RETSATQ6NUM9 610 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 DPY19L3Q6ZPD9 716 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 OR7D4Q8NG98 312 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 GRIN3AQ8TCU5 1115 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 PPP1R16AQ96I34 528 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 DCBLD2Q96PD2 775 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 NAA15Q9BXJ9 866 aaKnown RBP24.44■■□□□ 1.5
LSM4-202ENST00000593564 TNKS2Q9H2K2 1166 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 ZFR2Q9UPR6 939 aaKnown RBP24.44■■□□□ 1.5
LSM4-202ENST00000593564 AK5Q9Y6K8 562 aa24.44■■□□□ 1.5
LSM4-202ENST00000593564 ZNF821O75541 412 aaPredicted RBP24.43■■□□□ 1.5
LSM4-202ENST00000593564 DGKAP23743 735 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 ERCC5P28715 1186 aaPredicted RBP24.43■■□□□ 1.5
LSM4-202ENST00000593564 ABCG1P45844 678 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 DPCR1Q3MIW9 517 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 TMEM259Q4ZIN3 620 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 ARCQ7LC44 396 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 MSANTD4Q8NCY6 345 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 OR13H1Q8NG92 308 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 OR4C6Q8NH72 309 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 CEP44Q9C0F1 390 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 CLSTN2Q9H4D0 955 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 FZD3Q9NPG1 666 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 TMEM59LQ9UK28 342 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 WASF2Q9Y6W5 498 aa24.43■■□□□ 1.5
LSM4-202ENST00000593564 SRGAP2O75044 1071 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 LEFTY1O75610 366 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 ZMPSTE24O75844 475 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 PCDH8O95206 1070 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 UCHL3P15374 230 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 SERPINH1P50454 418 aaKnown RBP24.42■■□□□ 1.5
LSM4-202ENST00000593564 E2F1Q01094 437 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 INSM1Q01101 510 aaPredicted RBP24.42■■□□□ 1.5
LSM4-202ENST00000593564 SEMG2Q02383 582 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 SLC20A2Q08357 652 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 HS1BP3Q53T59 392 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 C2CD6Q53TS8 623 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 GCNT7Q6ZNI0 430 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 ABI3BPQ7Z7G0 1075 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 NOP9Q86U38 636 aaKnown RBP24.42■■□□□ 1.5
LSM4-202ENST00000593564 PCDH20Q8N6Y1 951 aaKnown RBP24.42■■□□□ 1.5
LSM4-202ENST00000593564 DCBLD1Q8N8Z6 715 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 FAM174AQ8TBP5 190 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 CRELD1Q96HD1 420 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 CFAP57Q96MR6 1250 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 BBC3Q96PG8 261 aaPredicted RBP24.42■■□□□ 1.5
LSM4-202ENST00000593564 SPON2Q9BUD6 331 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 ZYG11BQ9C0D3 744 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 ATP13A1Q9HD20 1204 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 UCKL1Q9NWZ5 548 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 CLCA2Q9UQC9 943 aa24.42■■□□□ 1.5
LSM4-202ENST00000593564 GOLGA8SH3BPF8 625 aa24.41■■□□□ 1.5
LSM4-202ENST00000593564 TLX3O43711 291 aaPredicted RBP24.41■■□□□ 1.5
LSM4-202ENST00000593564 ENDOD1O94919 500 aa24.41■■□□□ 1.5
LSM4-202ENST00000593564 EIF2S3P41091 472 aaKnown RBP24.41■■□□□ 1.5
LSM4-202ENST00000593564 NEK3P51956 506 aa24.41■■□□□ 1.5
LSM4-202ENST00000593564 NOMO3P69849 1222 aa24.41■■□□□ 1.5
LSM4-202ENST00000593564 HSP90AA4PQ58FG1 418 aa24.41■■□□□ 1.5
LSM4-202ENST00000593564 SEL1L3Q68CR1 1132 aa24.41■■□□□ 1.5
LSM4-202ENST00000593564 FAM131BQ86XD5 332 aa24.41■■□□□ 1.5
LSM4-202ENST00000593564 IFT43Q96FT9 208 aa24.41■■□□□ 1.5
LSM4-202ENST00000593564 CALN1Q9BXU9 219 aa24.41■■□□□ 1.5
LSM4-202ENST00000593564 PPARGC1AQ9UBK2 798 aaKnown RBP24.41■■□□□ 1.5
LSM4-202ENST00000593564 DACH1Q9UI36 760 aa24.41■■□□□ 1.5
LSM4-202ENST00000593564 FAM170AA1A519 330 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 F8VZ95 297 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 PIAS2O75928 621 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 ITGB7P26010 798 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 CLDN2P57739 230 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 ARF5P84085 180 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 DAB2P98082 770 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 GNA12Q03113 381 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 NAA35Q5VZE5 725 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 KIAA1161Q6NSJ0 714 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 SLC22A18ASQ8N1D0 253 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 EPS8L1Q8TE68 723 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 CPA5Q8WXQ8 436 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 HEPHQ9BQS7 1158 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 STK33Q9BYT3 514 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 DOCK4Q8N1I0 1966 aa24.4■■□□□ 1.5
LSM4-202ENST00000593564 CXorf51AA0A1B0GTR3 108 aa24.39■■□□□ 1.49
LSM4-202ENST00000593564 A6NNZ2 444 aa24.39■■□□□ 1.49
LSM4-202ENST00000593564 PES1O00541 588 aaKnown RBP24.39■■□□□ 1.49
LSM4-202ENST00000593564 MMEP08473 750 aa24.39■■□□□ 1.49
LSM4-202ENST00000593564 GIMD1P0DJR0 217 aa24.39■■□□□ 1.49
LSM4-202ENST00000593564 ADRB3P13945 408 aa24.39■■□□□ 1.49
LSM4-202ENST00000593564 L1CAMP32004 1257 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms