RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 WDR5BQ86VZ2 330 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 LONP2Q86WA8 852 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 TMPRSS6Q8IU80 811 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 CCDC50Q8IVM0 306 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 ZBTB44Q8NCP5 570 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 OR2A12Q8NGT7 310 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 OR2T3Q8NH03 318 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.13□□□□□ -0.79
TPM4-216ENST00000592822 ISG20Q96AZ6 181 aaKnown RBP10.13□□□□□ -0.79
TPM4-216ENST00000592822 HERPUD2Q9BSE4 406 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 HEMGNQ9BXL5 484 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 FAM126AQ9BYI3 521 aaPredicted RBP10.13□□□□□ -0.79
TPM4-216ENST00000592822 TPSD1Q9BZJ3 242 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 CEP44Q9C0F1 390 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 RSPH9Q9H1X1 276 aaPredicted RBP10.13□□□□□ -0.79
TPM4-216ENST00000592822 TNKS2Q9H2K2 1166 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 PRDM16Q9HAZ2 1276 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 SP110Q9HB58 689 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 ZSCAN32Q9NX65 697 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 DTLQ9NZJ0 730 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 BCCIPQ9P287 314 aaKnown RBP eCLIP10.13□□□□□ -0.79
TPM4-216ENST00000592822 UBA2Q9UBT2 640 aaPredicted RBP10.13□□□□□ -0.79
TPM4-216ENST00000592822 RAPGEFL1Q9UHV5 662 aa10.13□□□□□ -0.79
TPM4-216ENST00000592822 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.13□□□□□ -0.79
TPM4-216ENST00000592822 PLXND1Q9Y4D7 1925 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 MCF2LO15068 1137 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 HRO43593 1189 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 BNIP3LO60238 219 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 CST8O60676 142 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 LILRB5O75023 590 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 PECAM1P16284 738 aaPredicted RBP10.12□□□□□ -0.79
TPM4-216ENST00000592822 ZFXP17010 805 aaPredicted RBP10.12□□□□□ -0.79
TPM4-216ENST00000592822 PTPN7P35236 360 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 GARSP41250 739 aaKnown RBP10.12□□□□□ -0.79
TPM4-216ENST00000592822 DNA2P51530 1060 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 PTPN5P54829 565 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 NRLP54845 237 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 DYNLT1P63172 113 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 SRSF5Q13243 272 aaKnown RBP10.12□□□□□ -0.79
TPM4-216ENST00000592822 ZNF211Q13398 564 aaPredicted RBP10.12□□□□□ -0.79
TPM4-216ENST00000592822 TFDP2Q14188 446 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 KAZNQ674X7 775 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 KIAA1324Q6UXG2 1013 aaKnown RBP10.12□□□□□ -0.79
TPM4-216ENST00000592822 CACUL1Q86Y37 369 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 LRRC49Q8IUZ0 686 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 PGBD3Q8N328 593 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 ATPAF2Q8N5M1 289 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 PCDH20Q8N6Y1 951 aaKnown RBP10.12□□□□□ -0.79
TPM4-216ENST00000592822 UBL4BQ8N7F7 174 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 CHST14Q8NCH0 376 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 TRIM58Q8NG06 486 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 LRRN4Q8WUT4 740 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 UBE2Q2Q8WVN8 375 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 CASKIN2Q8WXE0 1202 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 VOPP1Q96AW1 172 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 TSGA13Q96PP4 275 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 ALS2CR12Q96Q35 445 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 OSBPL8Q9BZF1 889 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 TM6SF2Q9BZW4 377 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 FBRSQ9HAH7 460 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 CD93Q9NPY3 652 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 SAE1Q9UBE0 346 aaPredicted RBP10.12□□□□□ -0.79
TPM4-216ENST00000592822 LHX3Q9UBR4 397 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 HCN4Q9Y3Q4 1203 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 HEY1Q9Y5J3 304 aa10.12□□□□□ -0.79
TPM4-216ENST00000592822 RNF103O00237 685 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 ZBTB24O43167 697 aaPredicted RBP10.11□□□□□ -0.79
TPM4-216ENST00000592822 GSRP00390 522 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 CTSLP07711 333 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 SLC10A7Q0GE19 358 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 ELAVL3Q14576 367 aaKnown RBP10.11□□□□□ -0.79
TPM4-216ENST00000592822 RPS6KA1Q15418 735 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 MAP7D1Q3KQU3 841 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 CARD16Q5EG05 197 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 ATXN7L2Q5T6C5 722 aaPredicted RBP10.11□□□□□ -0.79
TPM4-216ENST00000592822 TMCO4Q5TGY1 634 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 ZNF776Q68DI1 518 aaPredicted RBP10.11□□□□□ -0.79
TPM4-216ENST00000592822 DPY19L3Q6ZPD9 716 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 BBS12Q6ZW61 710 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 METTL3Q86U44 580 aaKnown RBP10.11□□□□□ -0.79
TPM4-216ENST00000592822 MMAAQ8IVH4 418 aaKnown RBP10.11□□□□□ -0.79
TPM4-216ENST00000592822 PLPP6Q8IY26 295 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 FAM160A2Q8N612 972 aaPredicted RBP10.11□□□□□ -0.79
TPM4-216ENST00000592822 FRMD1Q8N878 549 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 RLN3Q8WXF3 142 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 OR8D1Q8WZ84 308 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 PRCCQ92733 491 aaPredicted RBP10.11□□□□□ -0.79
TPM4-216ENST00000592822 SIPA1Q96FS4 1042 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 ZNF419Q96HQ0 510 aaPredicted RBP10.11□□□□□ -0.79
TPM4-216ENST00000592822 ZNF599Q96NL3 588 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 OLFM3Q96PB7 478 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 USP36Q9P275 1121 aaKnown RBP10.11□□□□□ -0.79
TPM4-216ENST00000592822 HECAQ9UBI9 543 aaPredicted RBP10.11□□□□□ -0.79
TPM4-216ENST00000592822 SARDHQ9UL12 918 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 PPM1HQ9ULR3 514 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 INVSQ9Y283 1065 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 EFR3BQ9Y2G0 817 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 PCDHGA2Q9Y5H1 932 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 WASF2Q9Y6W5 498 aa10.11□□□□□ -0.79
TPM4-216ENST00000592822 R4GN57 208 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms