RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 K7ERQ8 282 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 PMM2O15305 246 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 CSF2P04141 144 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 NME1P15531 152 aaKnown RBP20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 SKOR1P84550 965 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 GCNT1Q02742 428 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 FZD2Q14332 565 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 NR0B2Q15466 257 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 CCDC40Q4G0X9 1142 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 TMEM259Q4ZIN3 620 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 ARSIQ5FYB1 569 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 TMEM110Q86TL2 294 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 PARGQ86W56 976 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 ARHGEF19Q8IW93 802 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 PPP1R16AQ96I34 528 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 BMFQ96LC9 184 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 C2orf49Q9BVC5 232 aaPredicted RBP20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 HDAC8Q9BY41 377 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 SLC17A9Q9BYT1 436 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 HS3ST4Q9Y661 456 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 CSNK1G3Q9Y6M4 447 aa20.08■□□□□ 0.81
PRKCSH-216ENST00000592445 SPTA1P02549 2419 aa20.08■□□□□ 0.8
PRKCSH-216ENST00000592445 SPTY2D1-AS1A0A0U1RR47 76 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 POM121BA6NF01 834 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 RIOK3O14730 519 aaKnown RBP20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 AQP9O43315 295 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 SNAP91O60641 907 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 TNFSF15O95150 251 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 LETM1O95202 739 aaPredicted RBP20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 PAK4O96013 591 aaPredicted RBP20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 RRM1P23921 792 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 GGCXP38435 758 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 RECQLP46063 649 aaPredicted RBP20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 CSRP3P50461 194 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 RPS21P63220 83 aaKnown RBP20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 NFATC3Q12968 1075 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 NME3Q13232 169 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 DEFB133Q30KQ1 61 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 KYAT3Q6YP21 454 aaKnown RBP20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 DEFB106AQ8N104 65 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 CHST14Q8NCH0 376 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 WDR36Q8NI36 951 aaKnown RBP20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 LMO3Q8TAP4 145 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 PRR11Q96HE9 360 aaPredicted RBP20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 FEM1CQ96JP0 617 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 IL12RB2Q99665 862 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 IL36AQ9UHA7 158 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 SALL4Q9UJQ4 1053 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 TBC1D30Q9Y2I9 924 aa20.07■□□□□ 0.8
PRKCSH-216ENST00000592445 PMS2P1A4D2B8 440 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 EME2A4GXA9 379 aaPredicted RBP20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 CDRT15L2A8MXV6 281 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 MUSKO15146 869 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 TCEA3O75764 348 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 RHOCP08134 193 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 JUNDP17535 347 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 RABIFP47224 123 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 CDH4P55283 916 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 CLN3Q13286 438 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 MTA1Q13330 715 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 COBLL1Q53SF7 1204 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 KIAA1161Q6NSJ0 714 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 LMX1AQ8TE12 382 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 CCNL2Q96S94 520 aaPredicted RBP20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 SIK2Q9H0K1 926 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 TNKS2Q9H2K2 1166 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 SYNDIG1Q9H7V2 258 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 GPR27Q9NS67 375 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 VPS51Q9UID3 782 aa20.06■□□□□ 0.8
PRKCSH-216ENST00000592445 RNF103O00237 685 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 P4HA2O15460 535 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 THAP12O43422 761 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 SMAD6O43541 496 aaKnown RBP20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 LEFTY1O75610 366 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 ENDOD1O94919 500 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 RPIAP49247 311 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 NEK3P51956 506 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 PDCLQ13371 301 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 PDE1CQ14123 709 aaPredicted RBP20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 MEA1Q16626 185 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 ARL13BQ3SXY8 428 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 LINGO4Q6UY18 593 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 C14orf80Q86SX3 495 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 EHBP1Q8NDI1 1231 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 ZNF606Q8WXB4 792 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 GLMNQ92990 594 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 KREMEN1Q96MU8 473 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 SLC2A13Q96QE2 648 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 PSMB7Q99436 277 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 TRIM4Q9C037 500 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 KLF15Q9UIH9 416 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 CNTN6Q9UQ52 1028 aa20.05■□□□□ 0.8
PRKCSH-216ENST00000592445 BOD1L1Q8NFC6 3051 aa20.04■□□□□ 0.8
PRKCSH-216ENST00000592445 FPGTO14772 594 aa20.04■□□□□ 0.8
PRKCSH-216ENST00000592445 RAD51BO15315 384 aa20.04■□□□□ 0.8
PRKCSH-216ENST00000592445 HSF2BPO75031 334 aa20.04■□□□□ 0.8
PRKCSH-216ENST00000592445 PAGE1O75459 146 aa20.04■□□□□ 0.8
PRKCSH-216ENST00000592445 GRAP2O75791 330 aa20.04■□□□□ 0.8
PRKCSH-216ENST00000592445 CNTN5O94779 1100 aa20.04■□□□□ 0.8
PRKCSH-216ENST00000592445 GLI1P08151 1106 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms