RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 NECAB3Q96P71 396 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-214ENST00000592186 PPP1R2P1Q96PQ5 205 aa10.86□□□□□ -0.67
SMAD4-214ENST00000592186 PSKH2Q96QS6 385 aa10.86□□□□□ -0.67
SMAD4-214ENST00000592186 IL12RB2Q99665 862 aa10.86□□□□□ -0.67
SMAD4-214ENST00000592186 USP29Q9HBJ7 922 aa10.86□□□□□ -0.67
SMAD4-214ENST00000592186 RBM22Q9NW64 420 aaKnown RBP eCLIP10.86□□□□□ -0.677e-12■■■■□ 24.3
SMAD4-214ENST00000592186 TARSL2A2RTX5 802 aaKnown RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 C5orf60A6NFR6 353 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 SHISA7A6NL88 538 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 SGK1O00141 431 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 PDE2AO00408 941 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 KCNN4O15554 427 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 OPHN1O60890 802 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 GCATO75600 419 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 CD160O95971 181 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 GAS8O95995 478 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 MT-CO1P00395 513 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 EGFP01133 1207 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 JCHAINP01591 159 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 CHRNB1P11230 501 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 SRCP12931 536 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 GLDCP23378 1020 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 RBL1P28749 1068 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 NTSR1P30989 418 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 CTSOP43234 321 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 KIR2DL1P43626 348 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 MMP13P45452 471 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 MAPK8P45983 427 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 RECQLP46063 649 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 CSNK1DP48730 415 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 SNRPD1P62314 119 aaKnown RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 TUBB4BP68371 445 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 RAD51Q06609 339 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 SLC10A7Q0GE19 358 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 MESP2Q0VG99 397 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 ENPP2Q13822 863 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 ZNF234Q14588 700 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 ZNF235Q14590 738 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 GRM3Q14832 879 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 DLG2Q15700 870 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 TEX44Q53QW1 395 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 IER5LQ5T953 404 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 NAIF1Q69YI7 327 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 CCDC137Q6PK04 289 aaKnown RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 SERPINA13PQ6UXR4 307 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 LINGO4Q6UY18 593 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 ARHGAP36Q6ZRI8 547 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 TRIM67Q6ZTA4 783 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 SYDE1Q6ZW31 735 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 MAATS1Q7Z4T9 603 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 CHPFQ8IZ52 775 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 CCDC33Q8N5R6 958 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 ZNF513Q8N8E2 541 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 CCDC89Q8N998 374 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 NETO2Q8NC67 525 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 CYB5D2Q8WUJ1 264 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 ATG4AQ8WYN0 398 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 SLCO2A1Q92959 643 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 RTP4Q96DX8 246 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 RPL10LQ96L21 214 aaKnown RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 MRGPRX3Q96LB0 322 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 TMEM121Q9BTD3 319 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 IER2Q9BTL4 223 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 CINPQ9BW66 212 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 TMEM245Q9H330 911 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 MFSD1Q9H3U5 465 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 TBC1D17Q9HA65 648 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 LMAN1LQ9HAT1 526 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 LTB4R2Q9NPC1 389 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 PCYOX1Q9UHG3 505 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 SLCO3A1Q9UIG8 710 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 NDRG2Q9UN36 371 aaKnown RBP10.85□□□□□ -0.67
SMAD4-214ENST00000592186 SIT1Q9Y3P8 196 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 DOCK4Q8N1I0 1966 aa10.85□□□□□ -0.67
SMAD4-214ENST00000592186 EDDM13A0A1B0GTR0 161 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 CTAGE15A4D2H0 777 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 KCNK1O00180 336 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 RNF103O00237 685 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 ZBTB24O43167 697 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-214ENST00000592186 SYNCRIPO60506 623 aaKnown RBP10.84□□□□□ -0.67
SMAD4-214ENST00000592186 TMCC1O94876 653 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 POP4O95707 220 aaKnown RBP10.84□□□□□ -0.67
SMAD4-214ENST00000592186 GSRP00390 522 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 CTAGE8P0CG41 777 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 CD72P21854 359 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 MAGEA9P43362 315 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 RPS9P46781 194 aaKnown RBP10.84□□□□□ -0.67
SMAD4-214ENST00000592186 RHOAP61586 193 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 DHX34Q14147 1143 aaKnown RBP10.84□□□□□ -0.67
SMAD4-214ENST00000592186 UBXN2BQ14CS0 331 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 CYTH1Q15438 398 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 P3H1Q32P28 736 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 HNRNPA1L2Q32P51 320 aaKnown RBP10.84□□□□□ -0.67
SMAD4-214ENST00000592186 C2orf27AQ580R0 203 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 CARD16Q5EG05 197 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 EOGTQ5NDL2 527 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 EMC10Q5UCC4 262 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 ITPRIPL1Q6GPH6 555 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 PID1Q7Z2X4 250 aa10.84□□□□□ -0.67
SMAD4-214ENST00000592186 DSG4Q86SJ6 1040 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms