RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 CYP4V2Q6ZWL3 525 aaPredicted RBP27.79■■■□□ 2.04
SMAD4-213ENST00000591914 PCDH20Q8N6Y1 951 aaKnown RBP27.79■■■□□ 2.04
SMAD4-213ENST00000591914 CHST14Q8NCH0 376 aa27.79■■■□□ 2.04
SMAD4-213ENST00000591914 OR2I1PQ8NGU4 316 aa27.79■■■□□ 2.04
SMAD4-213ENST00000591914 EIF3CQ99613 913 aaKnown RBP27.79■■■□□ 2.04
SMAD4-213ENST00000591914 KDM4CQ9H3R0 1056 aa27.79■■■□□ 2.04
SMAD4-213ENST00000591914 CATSPERBQ9H7T0 1116 aa27.79■■■□□ 2.04
SMAD4-213ENST00000591914 TM9SF3Q9HD45 589 aa27.79■■■□□ 2.04
SMAD4-213ENST00000591914 DNAAF2Q9NVR5 837 aaKnown RBP27.79■■■□□ 2.04
SMAD4-213ENST00000591914 GPATCH2LQ9NWQ4 482 aa27.79■■■□□ 2.04
SMAD4-213ENST00000591914 PCSK1NQ9UHG2 260 aa27.79■■■□□ 2.04
SMAD4-213ENST00000591914 ACTL7AQ9Y615 435 aa27.79■■■□□ 2.04
SMAD4-213ENST00000591914 LRCH4O75427 683 aa27.78■■■□□ 2.04
SMAD4-213ENST00000591914 MIPP30301 263 aa27.78■■■□□ 2.04
SMAD4-213ENST00000591914 GEMIN4P57678 1058 aaKnown RBP27.78■■■□□ 2.04
SMAD4-213ENST00000591914 BNC1Q01954 994 aa27.78■■■□□ 2.04
SMAD4-213ENST00000591914 CNTN1Q12860 1018 aa27.78■■■□□ 2.04
SMAD4-213ENST00000591914 TRIM14Q14142 442 aa27.78■■■□□ 2.04
SMAD4-213ENST00000591914 POM121L1PQ3SYA9 428 aa27.78■■■□□ 2.04
SMAD4-213ENST00000591914 ERMARDQ5T6L9 678 aa27.78■■■□□ 2.04
SMAD4-213ENST00000591914 AGBL4Q5VU57 503 aa27.78■■■□□ 2.04
SMAD4-213ENST00000591914 DPY19L3Q6ZPD9 716 aa27.78■■■□□ 2.04
SMAD4-213ENST00000591914 ISG20Q96AZ6 181 aaKnown RBP27.78■■■□□ 2.04
SMAD4-213ENST00000591914 NCAPGQ9BPX3 1015 aa27.78■■■□□ 2.04
SMAD4-213ENST00000591914 SNRNP25Q9BV90 132 aaKnown RBP27.78■■■□□ 2.04
SMAD4-213ENST00000591914 THAP2Q9H0W7 228 aa27.78■■■□□ 2.04
SMAD4-213ENST00000591914 TPX2Q9ULW0 747 aaKnown RBP27.78■■■□□ 2.04
SMAD4-213ENST00000591914 HPCAL4Q9UM19 191 aa27.78■■■□□ 2.04
SMAD4-213ENST00000591914 FCF1Q9Y324 198 aaKnown RBP27.78■■■□□ 2.04
SMAD4-213ENST00000591914 A0A1W2PPC4 97 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 PLRG1O43660 514 aaKnown RBP27.77■■■□□ 2.04
SMAD4-213ENST00000591914 KDELR3O43731 214 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 OPHN1O60890 802 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 GJB3O75712 270 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 KCNK5O95279 499 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 PRNPP04156 253 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 RECQLP46063 649 aaPredicted RBP27.77■■■□□ 2.04
SMAD4-213ENST00000591914 YBEYP58557 167 aaPredicted RBP27.77■■■□□ 2.04
SMAD4-213ENST00000591914 TPI1P60174 286 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 ACAP1Q15027 740 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 CA9Q16790 459 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 ALKBH5Q6P6C2 394 aaKnown RBP27.77■■■□□ 2.04
SMAD4-213ENST00000591914 PSTKQ8IV42 348 aaKnown RBP27.77■■■□□ 2.04
SMAD4-213ENST00000591914 UMODL1-AS1Q8N2C9 162 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 DNAJC7Q99615 494 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 DHX35Q9H5Z1 703 aaKnown RBP27.77■■■□□ 2.04
SMAD4-213ENST00000591914 EBF2Q9HAK2 575 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 IL36AQ9UHA7 158 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 NENFQ9UMX5 172 aa27.77■■■□□ 2.04
SMAD4-213ENST00000591914 UPK3BL1B0FP48 263 aa27.76■■■□□ 2.03
SMAD4-213ENST00000591914 UPK3BL2E5RIL1 263 aa27.76■■■□□ 2.03
SMAD4-213ENST00000591914 PRPSAP2O60256 369 aa27.76■■■□□ 2.03
SMAD4-213ENST00000591914 CSRP1P21291 193 aaKnown RBP27.76■■■□□ 2.03
SMAD4-213ENST00000591914 PCK1P35558 622 aa27.76■■■□□ 2.03
SMAD4-213ENST00000591914 GRIA4P48058 902 aa27.76■■■□□ 2.03
SMAD4-213ENST00000591914 CSNK1EP49674 416 aaKnown RBP27.76■■■□□ 2.03
SMAD4-213ENST00000591914 VSTM4Q8IW00 320 aa27.76■■■□□ 2.03
SMAD4-213ENST00000591914 PLPP6Q8IY26 295 aa27.76■■■□□ 2.03
SMAD4-213ENST00000591914 WASF2Q9Y6W5 498 aa27.76■■■□□ 2.03
SMAD4-213ENST00000591914 PLXNA2O75051 1894 aa27.76■■■□□ 2.03
SMAD4-213ENST00000591914 ZSCAN5CA6NGD5 496 aaPredicted RBP27.75■■■□□ 2.03
SMAD4-213ENST00000591914 RNF103O00237 685 aa27.75■■■□□ 2.03
SMAD4-213ENST00000591914 KPNA3O00505 521 aaPredicted RBP27.75■■■□□ 2.03
SMAD4-213ENST00000591914 LATO43561 262 aa27.75■■■□□ 2.03
SMAD4-213ENST00000591914 CYP1A2P05177 515 aa27.75■■■□□ 2.03
SMAD4-213ENST00000591914 PARP15Q460N3 678 aa27.75■■■□□ 2.03
SMAD4-213ENST00000591914 CARD16Q5EG05 197 aa27.75■■■□□ 2.03
SMAD4-213ENST00000591914 PIP5KL1Q5T9C9 394 aa27.75■■■□□ 2.03
SMAD4-213ENST00000591914 OR8K1Q8NGG5 319 aa27.75■■■□□ 2.03
SMAD4-213ENST00000591914 GRIN3AQ8TCU5 1115 aa27.75■■■□□ 2.03
SMAD4-213ENST00000591914 TBC1D3DA0A087WVF3 549 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 TBC1D3IA0A087WXS9 549 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 TBC1D3EA0A087X179 549 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 TBC1D3KA0A087X1G2 549 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 A0A1B0GVT2 93 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 TBC1D3FA6NER0 549 aaPredicted RBP27.74■■■□□ 2.03
SMAD4-213ENST00000591914 TBC1D3LB9A6J9 549 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 ADRB1P08588 477 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 TBC1D3HP0C7X1 549 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 CCNHP51946 323 aaPredicted RBP27.74■■■□□ 2.03
SMAD4-213ENST00000591914 TAS2R38P59533 333 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 PPP2CBP62714 309 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 RACK1P63244 317 aaKnown RBP27.74■■■□□ 2.03
SMAD4-213ENST00000591914 PPP2CAP67775 309 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 SLC14A1Q13336 389 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 TEAD4Q15561 434 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 ARSIQ5FYB1 569 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 CCDC122Q5T0U0 273 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 TBC1D3GQ6DHY5 549 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 TBC1D3CQ6IPX1 549 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 PSAPL1Q6NUJ1 521 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 IL27RAQ6UWB1 636 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 PIP4P1Q86T03 277 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 TBC1D3Q8IZP1 549 aaPredicted RBP27.74■■■□□ 2.03
SMAD4-213ENST00000591914 ARRDC3Q96B67 414 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 HMCESQ96FZ2 354 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 KCTD15Q96SI1 283 aaPredicted RBP27.74■■■□□ 2.03
SMAD4-213ENST00000591914 KLC2Q9H0B6 622 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 DONSONQ9NYP3 566 aa27.74■■■□□ 2.03
SMAD4-213ENST00000591914 RASA4BC9J798 803 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms