RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 CCDC15Q0P6D6 951 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 CNTN1Q12860 1018 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 CARD16Q5EG05 197 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 SPECC1LQ69YQ0 1117 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 C22orf39Q6P5X5 142 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 ALKBH5Q6P6C2 394 aaKnown RBP12.33□□□□□ -0.44
TPM4-212ENST00000590180 DPY19L3Q6ZPD9 716 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 ADAT2Q7Z6V5 191 aaKnown RBP12.33□□□□□ -0.44
TPM4-212ENST00000590180 ARFGAP1Q8N6T3 406 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 RTL3Q8N8U3 475 aaKnown RBP12.33□□□□□ -0.44
TPM4-212ENST00000590180 TMIEQ8NEW7 156 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 OR8K1Q8NGG5 319 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 C1orf216Q8TAB5 229 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 NCAPGQ9BPX3 1015 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 ZDHHC5Q9C0B5 715 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 ZNHIT6Q9NWK9 470 aaKnown RBP12.33□□□□□ -0.44
TPM4-212ENST00000590180 IL36AQ9UHA7 158 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 AP4E1Q9UPM8 1137 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 CACNA1EQ15878 2313 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 CABIN1Q9Y6J0 2220 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 DOCK4Q8N1I0 1966 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 A0A1W2PPC4 97 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 EEF2KO00418 725 aaKnown RBP12.32□□□□□ -0.44
TPM4-212ENST00000590180 SLC7A4O43246 635 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 IGHV4-34P06331 123 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 CTSLP07711 333 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 DRD3P35462 400 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 EIF4A3P38919 411 aaKnown RBP12.32□□□□□ -0.44
TPM4-212ENST00000590180 ADPRHP54922 357 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 GEMIN4P57678 1058 aaKnown RBP12.32□□□□□ -0.44
TPM4-212ENST00000590180 YBEYP58557 167 aaPredicted RBP12.32□□□□□ -0.44
TPM4-212ENST00000590180 GRIK2Q13002 908 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 CA9Q16790 459 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 PPP6R3Q5H9R7 873 aaPredicted RBP12.32□□□□□ -0.44
TPM4-212ENST00000590180 PSAPL1Q6NUJ1 521 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 PRPF39Q86UA1 669 aaKnown RBP12.32□□□□□ -0.44
TPM4-212ENST00000590180 PCDH20Q8N6Y1 951 aaKnown RBP12.32□□□□□ -0.44
TPM4-212ENST00000590180 DEFB124Q8NES8 71 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 GRIN3AQ8TCU5 1115 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 FNIP1Q8TF40 1166 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 HEPHQ9BQS7 1158 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 TM6SF2Q9BZW4 377 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 CEP44Q9C0F1 390 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 THAP2Q9H0W7 228 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 DEF6Q9H4E7 631 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 SLC32A1Q9H598 525 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 GAREM1Q9H706 876 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 TM9SF3Q9HD45 589 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 AASDHPPTQ9NRN7 309 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 DONSONQ9NYP3 566 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 ARHGAP20Q9P2F6 1191 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 HECAQ9UBI9 543 aaPredicted RBP12.32□□□□□ -0.44
TPM4-212ENST00000590180 SLCO1B1Q9Y6L6 691 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 MUC22E2RYF6 1773 aaPredicted RBP12.32□□□□□ -0.44
TPM4-212ENST00000590180 PCNX2A6NKB5 2137 aa12.32□□□□□ -0.44
TPM4-212ENST00000590180 WASH4PA8MWX3 477 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 RASA4BC9J798 803 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 KCNK3O14649 394 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 GIPC1O14908 333 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 FGF10O15520 208 aaPredicted RBP12.31□□□□□ -0.44
TPM4-212ENST00000590180 RASA4O43374 803 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 ZNF821O75541 412 aaPredicted RBP12.31□□□□□ -0.44
TPM4-212ENST00000590180 LEFTY1O75610 366 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 CD160O95971 181 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 CSRP1P21291 193 aaKnown RBP12.31□□□□□ -0.44
TPM4-212ENST00000590180 MAT2AP31153 395 aaKnown RBP12.31□□□□□ -0.44
TPM4-212ENST00000590180 SSR1P43307 286 aaKnown RBP12.31□□□□□ -0.44
TPM4-212ENST00000590180 CCR5P51681 352 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 C21orf59P57076 290 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 ZNF252P-AS1Q0IIN9 211 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 SEMA3BQ13214 749 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 TRIM14Q14142 442 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 ACAP1Q15027 740 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 KIF19Q2TAC6 998 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 HLA-BQ31612 363 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 N4BP2L1Q5TBK1 243 aaPredicted RBP12.31□□□□□ -0.44
TPM4-212ENST00000590180 IL27RAQ6UWB1 636 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 VSTM4Q8IW00 320 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 ARRDC3Q96B67 414 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 SKA1Q96BD8 255 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 HMCESQ96FZ2 354 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 BTBD6Q96KE9 485 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 PEBP4Q96S96 227 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 KCTD15Q96SI1 283 aaPredicted RBP12.31□□□□□ -0.44
TPM4-212ENST00000590180 SNRNP25Q9BV90 132 aaKnown RBP12.31□□□□□ -0.44
TPM4-212ENST00000590180 NUP85Q9BW27 656 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 NOL6Q9H6R4 1146 aaKnown RBP12.31□□□□□ -0.44
TPM4-212ENST00000590180 ZWILCHQ9H900 591 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 OSGEPQ9NPF4 335 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 IP6K2Q9UHH9 426 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 NEU3Q9UQ49 428 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 ANKRD6Q9Y2G4 727 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 ADAMTS9Q9P2N4 1935 aa12.31□□□□□ -0.44
TPM4-212ENST00000590180 TNRC6BQ9UPQ9 1833 aaKnown RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 ZSCAN5CA6NGD5 496 aaPredicted RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 EIF3CLB5ME19 914 aaKnown RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 MYO1FO00160 1098 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 KRIT1O00522 736 aa12.3□□□□□ -0.44
TPM4-212ENST00000590180 PLRG1O43660 514 aaKnown RBP12.3□□□□□ -0.44
TPM4-212ENST00000590180 AKR1B10O60218 316 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms