RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 SLC20A2Q08357 652 aa21.02■□□□□ 0.96
CIRBP-226ENST00000590171 MAMLD1Q13495 774 aa21.02■□□□□ 0.96
CIRBP-226ENST00000590171 HNRNPDQ14103 355 aaKnown RBP21.02■□□□□ 0.96
CIRBP-226ENST00000590171 EFHC2Q5JST6 749 aa21.02■□□□□ 0.96
CIRBP-226ENST00000590171 PIP5KL1Q5T9C9 394 aa21.02■□□□□ 0.96
CIRBP-226ENST00000590171 PPP1R2P3Q6NXS1 205 aa21.02■□□□□ 0.96
CIRBP-226ENST00000590171 DPY19L3Q6ZPD9 716 aa21.02■□□□□ 0.96
CIRBP-226ENST00000590171 TMIEQ8NEW7 156 aa21.02■□□□□ 0.96
CIRBP-226ENST00000590171 ARHGEF2Q92974 986 aaKnown RBP21.02■□□□□ 0.96
CIRBP-226ENST00000590171 ARRDC3Q96B67 414 aa21.02■□□□□ 0.96
CIRBP-226ENST00000590171 CEP44Q9C0F1 390 aa21.02■□□□□ 0.96
CIRBP-226ENST00000590171 AASDHPPTQ9NRN7 309 aa21.02■□□□□ 0.96
CIRBP-226ENST00000590171 PCOLCE2Q9UKZ9 415 aa21.02■□□□□ 0.96
CIRBP-226ENST00000590171 TPX2Q9ULW0 747 aaKnown RBP21.02■□□□□ 0.96
CIRBP-226ENST00000590171 FZD10Q9ULW2 581 aa21.02■□□□□ 0.96
CIRBP-226ENST00000590171 FCF1Q9Y324 198 aaKnown RBP21.02■□□□□ 0.96
CIRBP-226ENST00000590171 H0Y8X5 98 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 CBFA2T3O75081 653 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 PRNPP04156 253 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 L1CAMP32004 1257 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 ETFBP38117 255 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 C21orf59P57076 290 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 FANCCQ00597 558 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 PLEKHA7Q6IQ23 1121 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 DBX2Q6ZNG2 339 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 GRIN3AQ8TCU5 1115 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 SERAC1Q96JX3 654 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 EDEM3Q9BZQ6 932 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 ARHGAP20Q9P2F6 1191 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 IL36AQ9UHA7 158 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 PCDHGB2Q9Y5G2 931 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 WASF2Q9Y6W5 498 aa21.01■□□□□ 0.95
CIRBP-226ENST00000590171 A0A1W2PR77 199 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 DDX3XO00571 662 aaKnown RBP eCLIP21■□□□□ 0.951e-13■■■□□ 16.1
CIRBP-226ENST00000590171 RAMP2O60895 175 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 CD38P28907 300 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 EPHB2P29323 1055 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 MAT2AP31153 395 aaKnown RBP21■□□□□ 0.95
CIRBP-226ENST00000590171 PBX1P40424 430 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 RECQLP46063 649 aaPredicted RBP21■□□□□ 0.95
CIRBP-226ENST00000590171 TPM4P67936 248 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 KLHL30Q0D2K2 578 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 TRIP6Q15654 476 aaKnown RBP21■□□□□ 0.95
CIRBP-226ENST00000590171 ZNF423Q2M1K9 1284 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 ARSIQ5FYB1 569 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 FIGNQ5HY92 759 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 TMC6Q7Z403 805 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 TRIM69Q86WT6 500 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 PCDH20Q8N6Y1 951 aaKnown RBP21■□□□□ 0.95
CIRBP-226ENST00000590171 SETD7Q8WTS6 366 aaKnown RBP21■□□□□ 0.95
CIRBP-226ENST00000590171 MAGEH1Q9H213 219 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 PARVAQ9NVD7 372 aa21■□□□□ 0.95
CIRBP-226ENST00000590171 CXorf51AA0A1B0GTR3 108 aa20.99■□□□□ 0.95
CIRBP-226ENST00000590171 CREB3O43889 395 aa20.99■□□□□ 0.95
CIRBP-226ENST00000590171 LEFTY1O75610 366 aa20.99■□□□□ 0.95
CIRBP-226ENST00000590171 SKILP12757 684 aa20.99■□□□□ 0.95
CIRBP-226ENST00000590171 CCT8P50990 548 aa20.99■□□□□ 0.95
CIRBP-226ENST00000590171 CCNHP51946 323 aaPredicted RBP20.99■□□□□ 0.95
CIRBP-226ENST00000590171 AIF1P55008 147 aa20.99■□□□□ 0.95
CIRBP-226ENST00000590171 CARD16Q5EG05 197 aa20.99■□□□□ 0.95
CIRBP-226ENST00000590171 NAPEPLDQ6IQ20 393 aa20.99■□□□□ 0.95
CIRBP-226ENST00000590171 PRPF39Q86UA1 669 aaKnown RBP20.99■□□□□ 0.95
CIRBP-226ENST00000590171 RTL3Q8N8U3 475 aaKnown RBP20.99■□□□□ 0.95
CIRBP-226ENST00000590171 NOL6Q9H6R4 1146 aaKnown RBP20.99■□□□□ 0.95
CIRBP-226ENST00000590171 PREBQ9HCU5 417 aa20.99■□□□□ 0.95
CIRBP-226ENST00000590171 PCDHB9Q9Y5E1 797 aa20.99■□□□□ 0.95
CIRBP-226ENST00000590171 FLRT2O43155 660 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 HYAL3O43820 417 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-226ENST00000590171 FTLP02792 175 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-226ENST00000590171 GZMAP12544 262 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 PSMA2P25787 234 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 DNA2P51530 1060 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 IL9RQ01113 521 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 POLD3Q15054 466 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-226ENST00000590171 LEKR1Q6ZMV7 388 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 BAHD1Q8TBE0 780 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-226ENST00000590171 ISG20Q96AZ6 181 aaKnown RBP20.98■□□□□ 0.95
CIRBP-226ENST00000590171 SKA1Q96BD8 255 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 EPAS1Q99814 870 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 HEPHQ9BQS7 1158 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 SCNM1Q9BWG6 230 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 TM6SF2Q9BZW4 377 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 TRIM7Q9C029 511 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 DYRK4Q9NR20 520 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 BTBD3Q9Y2F9 522 aa20.98■□□□□ 0.95
CIRBP-226ENST00000590171 TMEM191CA6NGB0 347 aa20.97■□□□□ 0.95
CIRBP-226ENST00000590171 RNGTTO60942 597 aaKnown RBP20.97■□□□□ 0.95
CIRBP-226ENST00000590171 DESP17661 470 aa20.97■□□□□ 0.95
CIRBP-226ENST00000590171 UBASH3AP57075 661 aa20.97■□□□□ 0.95
CIRBP-226ENST00000590171 GEMIN4P57678 1058 aaKnown RBP20.97■□□□□ 0.95
CIRBP-226ENST00000590171 ZSCAN23Q3MJ62 389 aa20.97■□□□□ 0.95
CIRBP-226ENST00000590171 PRAMEF14Q5SWL7 426 aa20.97■□□□□ 0.95
CIRBP-226ENST00000590171 ERN2Q76MJ5 926 aaKnown RBP20.97■□□□□ 0.95
CIRBP-226ENST00000590171 ARFGAP1Q8N6T3 406 aa20.97■□□□□ 0.95
CIRBP-226ENST00000590171 PPP1R16AQ96I34 528 aa20.97■□□□□ 0.95
CIRBP-226ENST00000590171 ELF4Q99607 663 aaPredicted RBP20.97■□□□□ 0.95
CIRBP-226ENST00000590171 HDAC8Q9BY41 377 aa20.97■□□□□ 0.95
CIRBP-226ENST00000590171 GPATCH2LQ9NWQ4 482 aa20.97■□□□□ 0.95
CIRBP-226ENST00000590171 CNOT8Q9UFF9 292 aaKnown RBP20.97■□□□□ 0.95
CIRBP-226ENST00000590171 HPCAL4Q9UM19 191 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms