RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 TUBB4AP04350 444 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 PYGMP11217 842 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 HOXB2P14652 356 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 GNSP15586 552 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 ACTN2P35609 894 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 TNFSF9P41273 254 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 ACADVLP49748 655 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 RARRES1P49788 294 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 CCZ1BP86790 482 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 CCZ1P86791 482 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-209ENST00000589941 GABPB1Q06547 395 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-209ENST00000589941 SPAG1Q07617 926 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 LRMPQ12912 555 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 KIF19Q2TAC6 998 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 MGAT5BQ3V5L5 792 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 SLC39A12Q504Y0 691 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 KCNT1Q5JUK3 1230 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 MON1AQ86VX9 555 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 LRRC8AQ8IWT6 810 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 SPC24Q8NBT2 197 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 SNRNP27Q8WVK2 155 aaKnown RBP8.21□□□□□ -1.1
SMAD4-209ENST00000589941 ZNF274Q96GC6 653 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-209ENST00000589941 HIC2Q96JB3 615 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 PWWP2AQ96N64 755 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 KCNMB3Q9NPA1 279 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 ANO10Q9NW15 660 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 CGNQ9P2M7 1197 aaKnown RBP8.21□□□□□ -1.1
SMAD4-209ENST00000589941 FTSJ1Q9UET6 329 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 DDX25Q9UHL0 483 aaKnown RBP8.21□□□□□ -1.1
SMAD4-209ENST00000589941 PCDHB1Q9Y5F3 818 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 RAD54BQ9Y620 910 aa8.21□□□□□ -1.1
SMAD4-209ENST00000589941 MORC2Q9Y6X9 1032 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-209ENST00000589941 LRRK1Q38SD2 2015 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 ANO9A1A5B4 782 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 GOLGA6L4A6NEF3 574 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 OR6C75A6NL08 312 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 ACKR2O00590 384 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 WNT9AO14904 365 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 PLD2O14939 933 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 TRIM24O15164 1050 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 ZBTB43O43298 467 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 SUV39H1O43463 412 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 NDUFS2O75306 463 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 RFPL3O75679 317 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 NFATC1O95644 943 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 CKMP06732 381 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 TNNT1P13805 278 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 KCNE1P15382 129 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 GRK6P43250 576 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 AARSP49588 968 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMAD4-209ENST00000589941 CSNK1EP49674 416 aaKnown RBP8.2□□□□□ -1.1
SMAD4-209ENST00000589941 GSDMDP57764 484 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 TLE1Q04724 770 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 DMP1Q13316 513 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-209ENST00000589941 VEPH1Q14D04 833 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 CCDC142Q17RM4 750 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 VMACQ2NL98 169 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 CR1LQ2VPA4 569 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 WDR45BQ5MNZ6 344 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 ATF7IP2Q5U623 682 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 EGFLAMQ63HQ2 1017 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 CD300LDQ6UXZ3 194 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 LCNL1Q6ZST4 164 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 Q6ZUG5 572 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 C11orf57Q6ZUT1 292 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-209ENST00000589941 GATAD2AQ86YP4 633 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 CREBRFQ8IUR6 639 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 ZBTB8OSQ8IWT0 167 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 TPH2Q8IWU9 490 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 DHX40Q8IX18 779 aaKnown RBP8.2□□□□□ -1.1
SMAD4-209ENST00000589941 TMTC2Q8N394 836 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 ARL14EPQ8N8R7 260 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-209ENST00000589941 ZNF248Q8NDW4 579 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 CCDC26Q8TAB7 109 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 UHMK1Q8TAS1 419 aaKnown RBP8.2□□□□□ -1.1
SMAD4-209ENST00000589941 PIGOQ8TEQ8 1089 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 LRRC15Q8TF66 581 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 DNASE2BQ8WZ79 361 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 HAS1Q92839 578 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 ZNF396Q96N95 335 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-209ENST00000589941 PNKPQ96T60 521 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 GPR174Q9BXC1 333 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 TRIM5Q9C035 493 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 GOLPH3LQ9H4A5 285 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 L2HGDHQ9H9P8 463 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 POLD4Q9HCU8 107 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 SLC38A7Q9NVC3 462 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 CBLCQ9ULV8 474 aa8.2□□□□□ -1.1
SMAD4-209ENST00000589941 MAGED2Q9UNF1 606 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-209ENST00000589941 KLF18A0A0U1RQI7 1052 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 FAM237AA0A1B0GTK4 181 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 KCNJ18B7U540 433 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 BCAT2O15382 392 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-209ENST00000589941 KLK10O43240 276 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 DKC1O60832 514 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMAD4-209ENST00000589941 SLITRK3O94933 977 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 YEATS4O95619 227 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 ASMTLO95671 621 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 AFPP02771 609 aaKnown RBP8.19□□□□□ -1.1
SMAD4-209ENST00000589941 APODP05090 189 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms