RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 TKTL2Q9H0I9 626 aa7.54□□□□□ -1.2
ZNF540-206ENST00000589117 WDR6Q9NNW5 1121 aaKnown RBP7.54□□□□□ -1.2
ZNF540-206ENST00000589117 CASS4Q9NQ75 786 aa7.54□□□□□ -1.2
ZNF540-206ENST00000589117 CRTAC1Q9NQ79 661 aa7.54□□□□□ -1.2
ZNF540-206ENST00000589117 COPG2Q9UBF2 871 aa7.54□□□□□ -1.2
ZNF540-206ENST00000589117 MARCOQ9UEW3 520 aaPredicted RBP7.54□□□□□ -1.2
ZNF540-206ENST00000589117 GJD2Q9UKL4 321 aa7.54□□□□□ -1.2
ZNF540-206ENST00000589117 ANGPTL2Q9UKU9 493 aa7.54□□□□□ -1.2
ZNF540-206ENST00000589117 ST3GAL5Q9UNP4 418 aa7.54□□□□□ -1.2
ZNF540-206ENST00000589117 MFHAS1Q9Y4C4 1052 aa7.54□□□□□ -1.2
ZNF540-206ENST00000589117 SCN4AP35499 1836 aa7.54□□□□□ -1.2
ZNF540-206ENST00000589117 SRCAPQ6ZRS2 3230 aa7.54□□□□□ -1.2
ZNF540-206ENST00000589117 MANSC4A6NHS7 340 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 H0Y3Z8 333 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 NRP1O14786 923 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 CELF2O95319 508 aaKnown RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 C6orf222P0C671 652 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 CYP2B6P20813 491 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 DNAJB1P25685 340 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 HOXC8P31273 242 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 CLCNKBP51801 687 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 LIMK2P53671 638 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ABCE1P61221 599 aaKnown RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 BEX3Q00994 111 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 KDSRQ06136 332 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 SLC34A1Q06495 639 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 MPP3Q13368 585 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ANKRD20A4Q4UJ75 823 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 METTL21CQ5VZV1 264 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 PDPK2PQ6A1A2 396 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 RINLQ6ZS11 566 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 NET1Q7Z628 596 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 LRRC49Q8IUZ0 686 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 RDH11Q8TC12 318 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 TEKT5Q96M29 485 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 KCNK16Q96T55 309 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 MIPEPQ99797 713 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 SMOQ99835 787 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 CEP41Q9BYV8 373 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 CATSPERBQ9H7T0 1116 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ZFAND3Q9H8U3 227 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 CSNK1G1Q9HCP0 422 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 DMAP1Q9NPF5 467 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 SNX15Q9NRS6 342 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 C20orf96Q9NUD7 363 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 DNAJC28Q9NX36 388 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ARMCX1Q9P291 453 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 STX18Q9P2W9 335 aaKnown RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ZNF212Q9UDV6 495 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 SOX13Q9UN79 622 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ANKRD6Q9Y2G4 727 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 DNAJC16Q9Y2G8 782 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 TRIP11Q15643 1979 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 MYBPHLA2RUH7 354 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ARL5CA6NH57 179 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 TMEM114B3SHH9 223 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 NVLO15381 856 aaKnown RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 FGF10O15520 208 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 TM7SF2O76062 418 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 B3GAT3O94766 335 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 SNUPNO95149 360 aaKnown RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 HSPA4LO95757 839 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 PROCP04070 461 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 FYNP06241 537 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 PAMP19021 973 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ATP6V1C1P21283 382 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 CCNCP24863 283 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ETFBP38117 255 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 INHBEP58166 350 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 AP2B1P63010 937 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 PITX1P78337 314 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 TSPY1Q01534 308 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 SERINC3Q13530 473 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 KPNB1Q14974 876 aaKnown RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 RCN1Q15293 331 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 GPR162Q16538 588 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 KHDC1Q4VXA5 237 aaKnown RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 BRMS1LQ5PSV4 323 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 OTUD1Q5VV17 481 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ARMC3Q5W041 872 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 PM20D1Q6GTS8 502 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 FSTL4Q6MZW2 842 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ZCCHC23Q6ZST2 131 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 HFE2Q6ZVN8 426 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 KCNMB4Q86W47 210 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 DCLK2Q8N568 766 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 DNAJC9Q8WXX5 260 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ISL2Q96A47 359 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 UROC1Q96N76 676 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 HAPLN3Q96S86 360 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 CCDC106Q9BWC9 280 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 NKX1-2Q9UD57 310 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-206ENST00000589117 DNAJB4Q9UDY4 337 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 NR2E3Q9Y5X4 410 aa7.53□□□□□ -1.2
ZNF540-206ENST00000589117 ZNF236Q9UL36 1845 aa7.52□□□□□ -1.2
ZNF540-206ENST00000589117 A0A096LPK6 155 aa7.52□□□□□ -1.2
ZNF540-206ENST00000589117 C2orf71A6NGG8 1288 aa7.52□□□□□ -1.2
ZNF540-206ENST00000589117 FAM72CH0Y354 149 aa7.52□□□□□ -1.2
ZNF540-206ENST00000589117 TRIM13O60858 407 aa7.52□□□□□ -1.2
ZNF540-206ENST00000589117 FBXO24O75426 580 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms