RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 RWDD2BP57060 319 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 RAD51Q06609 339 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 CCDC15Q0P6D6 951 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 SIM2Q14190 667 aaPredicted RBP12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 ZNF235Q14590 738 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 RFTN1Q14699 578 aaPredicted RBP12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 TFDP3Q5H9I0 405 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 C9orf64Q5T6V5 341 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 CCDC181Q5TID7 509 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 AFMIDQ63HM1 303 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 NCBP2-AS2Q69YL0 99 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 TIGD7Q6NT04 549 aaPredicted RBP12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 SLC36A4Q6YBV0 504 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 BZW1Q7L1Q6 419 aaKnown RBP12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 RCOR2Q8IZ40 523 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 STK40Q8N2I9 435 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 LRRC57Q8N9N7 239 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 EXD1Q8NHP7 514 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 FRS2Q8WU20 508 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 UBE2Q2Q8WVN8 375 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 ISG20Q96AZ6 181 aaKnown RBP12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 RNF25Q96BH1 459 aaPredicted RBP12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 GDAP1L1Q96MZ0 367 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 CINPQ9BW66 212 aaPredicted RBP12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 TM6SF2Q9BZW4 377 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 SLC39A8Q9C0K1 460 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 SLC6A17Q9H1V8 727 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 RSPH9Q9H1X1 276 aaPredicted RBP12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 TNKS2Q9H2K2 1166 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 IPO11Q9UI26 975 aaKnown RBP12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 CYP8B1Q9UNU6 501 aa12.1□□□□□ -0.47
SDHDP1-201ENST00000588055 K7ERQ8 282 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 PPP1R12AO14974 1030 aaPredicted RBP12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 LILRB5O75023 590 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 FTCDO95954 541 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 GSRP00390 522 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 VAV1P15498 845 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 MSNP26038 577 aaKnown RBP12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 CTNNA2P26232 953 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 P2RY2P41231 377 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 COPS2P61201 443 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 DYNLT1P63172 113 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 NHLH1Q02575 133 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 IL10RBQ08334 325 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 PAFAH1B3Q15102 231 aaKnown RBP12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 CST6Q15828 149 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 TMCO4Q5TGY1 634 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 KAZNQ674X7 775 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 LEKR1Q6ZMV7 388 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 SPOCD1Q6ZMY3 1216 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 ZNF662Q6ZS27 426 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 KBTBD6Q86V97 674 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 MMAAQ8IVH4 418 aaKnown RBP12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 ARHGAP12Q8IWW6 846 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 PAF1Q8N7H5 531 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 TRIM58Q8NG06 486 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 OR2AP1Q8NGE2 309 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 PCDH19Q8TAB3 1148 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 GRIN3AQ8TCU5 1115 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 PTPRN2Q92932 1015 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 NKD2Q969F2 451 aaPredicted RBP12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 ZNF599Q96NL3 588 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 RNF157Q96PX1 679 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 OMDQ99983 421 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 EPC1Q9H2F5 836 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 PABPC3Q9H361 631 aaKnown RBP12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 MTG2Q9H4K7 406 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 ZDHHC6Q9H6R6 413 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 CD248Q9HCU0 757 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 ETNK2Q9NVF9 386 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 SEPT3Q9UH03 358 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 IL36AQ9UHA7 158 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 RAPGEFL1Q9UHV5 662 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 SMG5Q9UPR3 1016 aaKnown RBP12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 PCDHA3Q9Y5H8 950 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 HEY1Q9Y5J3 304 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 CAPN6Q9Y6Q1 641 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 FANCMQ8IYD8 2048 aa12.09□□□□□ -0.47
SDHDP1-201ENST00000588055 PLXND1Q9Y4D7 1925 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 J3KR12 359 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 KPNA3O00505 521 aaPredicted RBP12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 MCF2LO15068 1137 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 SMAD6O43541 496 aaKnown RBP12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 RNASEH2AO75792 299 aaKnown RBP12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 RHOBTB1O94844 696 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 C5AR1P21730 350 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 TGM2P21980 687 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 IL4RP24394 825 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 CD6P30203 668 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 HSPA9P38646 679 aaKnown RBP12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 GARSP41250 739 aaKnown RBP12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 CDKN2BP42772 138 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 MAPK8P45983 427 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 MARCKSL1P49006 195 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 TPMTP51580 245 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 RENBPP51606 427 aa12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 CCNHP51946 323 aaPredicted RBP12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 RPS14P62263 151 aaKnown RBP12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 RPL6Q02878 288 aaKnown RBP12.08□□□□□ -0.48
SDHDP1-201ENST00000588055 GALNT2Q10471 571 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms