RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SLC10A7Q0GE19 358 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 AP1B1Q10567 949 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 PDK1Q15118 436 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 CRY1Q16526 586 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 HNRNPA1L2Q32P51 320 aaKnown RBP10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 HSF5Q4G112 596 aaPredicted RBP10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 EOGTQ5NDL2 527 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 C9orf64Q5T6V5 341 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 SDE2Q6IQ49 451 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 C22orf39Q6P5X5 142 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 Q6ZVU0 165 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 SYT13Q7L8C5 426 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 TRMT11Q7Z4G4 463 aaKnown RBP10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 LRRC49Q8IUZ0 686 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 CCDC13Q8IYE1 715 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 SPEM1Q8N4L4 309 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 ZNF419Q96HQ0 510 aaPredicted RBP10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 TNKS2Q9H2K2 1166 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 PRSS16Q9NQE7 514 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 BDP1A6H8Y1 2624 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 CKAP5Q14008 2032 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 EDDM13A0A1B0GTR0 161 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 CXorf51AA0A1B0GTR3 108 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 TTC24A2A3L6 582 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 H7C0C1 242 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 KCNK1O00180 336 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 RNF103O00237 685 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 DLL1O00548 723 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 PPP1R12AO14974 1030 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 MUSKO15146 869 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 MATN3O15232 486 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 BNIP3LO60238 219 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 ATG13O75143 517 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 PRLRP16471 622 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 TCP1P17987 556 aaKnown RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 MAGEA9P43362 315 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 RGRP47804 291 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 ATP5OP48047 213 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 CLCN6P51797 869 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 GEMIN4P57678 1058 aaKnown RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 EIF3EP60228 445 aaKnown RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 CAMK2GQ13555 558 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 LBRQ14739 615 aaKnown RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 PRKD1Q15139 912 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 E2F5Q15329 346 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 LONRF2Q1L5Z9 754 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 INO80DQ53TQ3 878 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 ATXN7L2Q5T6C5 722 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 TIGD7Q6NT04 549 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 BZW1Q7L1Q6 419 aaKnown RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 STK40Q8N2I9 435 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 PGBD5Q8N414 524 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 TSEN2Q8NCE0 465 aaKnown RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 OR2A12Q8NGT7 310 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 TFB1MQ8WVM0 346 aaKnown RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 C1orf54Q8WWF1 131 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 ATG4AQ8WYN0 398 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 MAML1Q92585 1016 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 EXOC2Q96KP1 924 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 ZNF599Q96NL3 588 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 TM6SF2Q9BZW4 377 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 CEP44Q9C0F1 390 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 SLC6A17Q9H1V8 727 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 SPATA6Q9NWH7 488 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 LHX3Q9UBR4 397 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 SUN2Q9UH99 717 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 TTC7AQ9ULT0 858 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 SAR1BQ9Y6B6 198 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 KMT2EQ8IZD2 1858 aa10.89□□□□□ -0.67
SMARCA4-213ENST00000587988 TARSL2A2RTX5 802 aaKnown RBP10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 PRR33A8MZF0 331 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 HACD1B0YJ81 288 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 CES2O00748 559 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 INSIG1O15503 277 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 SYNCRIPO60506 623 aaKnown RBP10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 GJB3O75712 270 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 JCHAINP01591 159 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 CTSLP07711 333 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 RBP3P10745 1247 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 CCNB1P14635 433 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 RBL1P28749 1068 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 CXCL12P48061 93 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 COPAP53621 1224 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 NRLP54845 237 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 MAXP61244 160 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 ZNF33AQ06730 810 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 ZBTB17Q13105 803 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 XRCC4Q13426 336 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 SNX1Q13596 522 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 HNRNPDQ14103 355 aaKnown RBP10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 RFTN1Q14699 578 aaPredicted RBP10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 SLC45A4Q5BKX6 768 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 TMEM31Q5JXX7 168 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 TMCO4Q5TGY1 634 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 MARC1Q5VT66 337 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 MAMSTRQ6ZN01 415 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 DPY19L3Q6ZPD9 716 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 CREG2Q8IUH2 290 aa10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 MAML2Q8IZL2 1156 aaPredicted RBP10.88□□□□□ -0.67
SMARCA4-213ENST00000587988 TEX26Q8N6G2 289 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms