RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 ATP6V0D2Q8N8Y2 350 aa16.11■□□□□ 0.17
NCLN-203ENST00000587740 SPC24Q8NBT2 197 aa16.11■□□□□ 0.17
NCLN-203ENST00000587740 LSM14AQ8ND56 463 aaKnown RBP16.11■□□□□ 0.17
NCLN-203ENST00000587740 SNIP1Q8TAD8 396 aaKnown RBP16.11■□□□□ 0.17
NCLN-203ENST00000587740 NT5C3BQ969T7 300 aa16.11■□□□□ 0.17
NCLN-203ENST00000587740 PGAP3Q96FM1 320 aaPredicted RBP16.11■□□□□ 0.17
NCLN-203ENST00000587740 MCEEQ96PE7 176 aa16.11■□□□□ 0.17
NCLN-203ENST00000587740 TBCBQ99426 244 aa16.11■□□□□ 0.17
NCLN-203ENST00000587740 NEUROG2Q9H2A3 272 aa16.11■□□□□ 0.17
NCLN-203ENST00000587740 FBXL12Q9NXK8 326 aa16.11■□□□□ 0.17
NCLN-203ENST00000587740 IMPACTQ9P2X3 320 aa16.11■□□□□ 0.17
NCLN-203ENST00000587740 PAXBP1Q9Y5B6 917 aa16.11■□□□□ 0.17
NCLN-203ENST00000587740 SCINQ9Y6U3 715 aa16.11■□□□□ 0.17
NCLN-203ENST00000587740 NAV2Q8IVL1 2488 aa16.11■□□□□ 0.17
NCLN-203ENST00000587740 ATMINO43313 823 aaPredicted RBP16.1■□□□□ 0.17
NCLN-203ENST00000587740 ACSL4O60488 711 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 ITGAVP06756 1048 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 DESP17661 470 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 TFE3P19532 575 aaPredicted RBP16.1■□□□□ 0.17
NCLN-203ENST00000587740 ATP11AP98196 1134 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 BNIP3Q12983 259 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 MTA1Q13330 715 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 ASTE1Q2TB18 679 aaPredicted RBP16.1■□□□□ 0.17
NCLN-203ENST00000587740 PPP1R15BQ5SWA1 713 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 PLEKHA7Q6IQ23 1121 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 RFWD3Q6PCD5 774 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 ZNF605Q86T29 641 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 BTN2A3PQ96KV6 586 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 PANX2Q96RD6 677 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 DDX50Q9BQ39 737 aaKnown RBP16.1■□□□□ 0.17
NCLN-203ENST00000587740 WDCPQ9H6R7 721 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 GRPEL1Q9HAV7 217 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 MRPL47Q9HD33 250 aaKnown RBP16.1■□□□□ 0.17
NCLN-203ENST00000587740 PIGVQ9NUD9 493 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 MYO1AQ9UBC5 1043 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 SUN2Q9UH99 717 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 DOCK9Q9BZ29 2069 aa16.1■□□□□ 0.17
NCLN-203ENST00000587740 DOCK4Q8N1I0 1966 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 GOLGA6L7A0A1B0GV03 622 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 A0A1W2PP55 124 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 MID1O15344 667 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 RRP8O43159 456 aaKnown RBP16.09■□□□□ 0.17
NCLN-203ENST00000587740 SIN3BO75182 1162 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 ATP5BP06576 529 aaKnown RBP16.09■□□□□ 0.17
NCLN-203ENST00000587740 CDK4P11802 303 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 EPHA8P29322 1005 aaPredicted RBP16.09■□□□□ 0.17
NCLN-203ENST00000587740 PTPN9P43378 593 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 RPL7AP62424 266 aaKnown RBP16.09■□□□□ 0.17
NCLN-203ENST00000587740 MAMLD1Q13495 774 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 CDO1Q16878 200 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 CCDC14Q49A88 953 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 BRMS1LQ5PSV4 323 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 OTUD1Q5VV17 481 aaPredicted RBP16.09■□□□□ 0.17
NCLN-203ENST00000587740 KANSL1Q7Z3B3 1105 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 GANCQ8TET4 914 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 INTS6Q9UL03 887 aaKnown RBP16.09■□□□□ 0.17
NCLN-203ENST00000587740 NCKAP1Q9Y2A7 1128 aa16.09■□□□□ 0.17
NCLN-203ENST00000587740 KCNU1A8MYU2 1149 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 BRINP1O60477 761 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 TBL1XO60907 577 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 ENDOD1O94919 500 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 POLR2EP19388 210 aaKnown RBP16.08■□□□□ 0.16
NCLN-203ENST00000587740 CD38P28907 300 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 SLC6A4P31645 630 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 CXCR3P49682 368 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 ZNF143P52747 638 aaPredicted RBP16.08■□□□□ 0.16
NCLN-203ENST00000587740 TLE3Q04726 772 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 CST6Q15828 149 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 C15orf59Q2T9L4 293 aaPredicted RBP16.08■□□□□ 0.16
NCLN-203ENST00000587740 HNRNPA1L2Q32P51 320 aaKnown RBP16.08■□□□□ 0.16
NCLN-203ENST00000587740 FAM133BQ5BKY9 247 aaKnown RBP16.08■□□□□ 0.16
NCLN-203ENST00000587740 C9orf64Q5T6V5 341 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 PIK3R6Q5UE93 754 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 STRADAQ7RTN6 431 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 GPR155Q7Z3F1 870 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 BNIPLQ7Z465 357 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 FAM172AQ8WUF8 416 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 FGF11Q92914 225 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 TTC17Q96AE7 1141 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 MYEOVQ96EZ4 313 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 MRGPRX3Q96LB0 322 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 IRX2Q9BZI1 471 aaPredicted RBP16.08■□□□□ 0.16
NCLN-203ENST00000587740 THAP2Q9H0W7 228 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 AASDHPPTQ9NRN7 309 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 SPTLC3Q9NUV7 552 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 NENFQ9UMX5 172 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 SCML1Q9UN30 329 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 MYO18BQ8IUG5 2567 aa16.08■□□□□ 0.16
NCLN-203ENST00000587740 TEX51A0A1B0GUA7 166 aa16.07■□□□□ 0.16
NCLN-203ENST00000587740 H2AFZP0C0S5 128 aa16.07■□□□□ 0.16
NCLN-203ENST00000587740 CYLC1P35663 651 aaPredicted RBP16.07■□□□□ 0.16
NCLN-203ENST00000587740 NXPH1P58417 271 aa16.07■□□□□ 0.16
NCLN-203ENST00000587740 CCDC173Q0VFZ6 552 aa16.07■□□□□ 0.16
NCLN-203ENST00000587740 MPP7Q5T2T1 576 aa16.07■□□□□ 0.16
NCLN-203ENST00000587740 NADSYN1Q6IA69 706 aa16.07■□□□□ 0.16
NCLN-203ENST00000587740 H2AFVQ71UI9 128 aa16.07■□□□□ 0.16
NCLN-203ENST00000587740 CHSY1Q86X52 802 aa16.07■□□□□ 0.16
NCLN-203ENST00000587740 TMTC1Q8IUR5 882 aa16.07■□□□□ 0.16
NCLN-203ENST00000587740 CCDC170Q8IYT3 715 aa16.07■□□□□ 0.16
NCLN-203ENST00000587740 OR2T34Q8NGX1 318 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms