RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 ASCL3Q9NQ33 180 aa16.71■□□□□ 0.27
NPC1-205ENST00000587163 PIGVQ9NUD9 493 aa16.71■□□□□ 0.27
NPC1-205ENST00000587163 DNAJC28Q9NX36 388 aa16.71■□□□□ 0.27
NPC1-205ENST00000587163 A0A0D9SEW6 157 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 A0A1W2PNU3 283 aaPredicted RBP16.7■□□□□ 0.26
NPC1-205ENST00000587163 POM121BA6NF01 834 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 M0QYT0 321 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 ZNF821O75541 412 aaPredicted RBP16.7■□□□□ 0.26
NPC1-205ENST00000587163 ENDOD1O94919 500 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 ERBB2P04626 1255 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 GP1BAP07359 652 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 SLC9A1P19634 815 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 PPP1R2P41236 205 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 FZD2Q14332 565 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 ARHGAP44Q17R89 818 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 TAF1BQ53T94 588 aaPredicted RBP16.7■□□□□ 0.26
NPC1-205ENST00000587163 ARTNQ5T4W7 220 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 C11orf57Q6ZUT1 292 aaPredicted RBP16.7■□□□□ 0.26
NPC1-205ENST00000587163 ENOSF1Q7L5Y1 443 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 GRIN3AQ8TCU5 1115 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 IFT43Q96FT9 208 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 C2orf49Q9BVC5 232 aaPredicted RBP16.7■□□□□ 0.26
NPC1-205ENST00000587163 HDAC8Q9BY41 377 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 SEMA4CQ9C0C4 833 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 ABCG4Q9H172 646 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 POLR1BQ9H9Y6 1135 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 DYRK4Q9NR20 520 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 GPR27Q9NS67 375 aa16.7■□□□□ 0.26
NPC1-205ENST00000587163 HOOK1Q9UJC3 728 aaKnown RBP16.7■□□□□ 0.26
NPC1-205ENST00000587163 BICDL2A1A5D9 508 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 NEMP2A6NFY4 417 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 BIN1O00499 593 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 RAD51BO15315 384 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 LEFTY1O75610 366 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 GNA14O95837 355 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 PAK4O96013 591 aaPredicted RBP16.69■□□□□ 0.26
NPC1-205ENST00000587163 PRNPP04156 253 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 RHOCP08134 193 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 ALPPL2P10696 532 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 TMPRSS3P57727 454 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 ERVPABLB-1P60509 514 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 SLC6A3Q01959 620 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 CCDC15Q0P6D6 951 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 MORC3Q14149 939 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 BROXQ5VW32 411 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 TRIM65Q6PJ69 517 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 DPY19L3Q6ZPD9 716 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 PTAR1Q7Z6K3 402 aaPredicted RBP16.69■□□□□ 0.26
NPC1-205ENST00000587163 LSMEM2Q8N112 164 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 C1orf131Q8NDD1 294 aaKnown RBP16.69■□□□□ 0.26
NPC1-205ENST00000587163 IFI44Q8TCB0 444 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 CCDC114Q96M63 670 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 SLC17A9Q9BYT1 436 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 TKTL2Q9H0I9 626 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 TMPRSS4Q9NRS4 437 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 ARHGEF38Q9NXL2 777 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 MPP6Q9NZW5 540 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 IL36AQ9UHA7 158 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 KLF15Q9UIH9 416 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 PCDHGC3Q9UN70 934 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 HS3ST3A1Q9Y663 406 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 WASF2Q9Y6W5 498 aa16.69■□□□□ 0.26
NPC1-205ENST00000587163 COL27A1Q8IZC6 1860 aaPredicted RBP16.69■□□□□ 0.26
NPC1-205ENST00000587163 A6NNZ2 444 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 KLK10O43240 276 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 DAB1O75553 588 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 TGM2P21980 687 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 NOS2P35228 1153 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 CXCR3P49682 368 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 RHDQ02161 417 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 MTA1Q13330 715 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 MAPK8IP2Q13387 824 aaPredicted RBP16.68■□□□□ 0.26
NPC1-205ENST00000587163 CDKN3Q16667 212 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 ISXQ2M1V0 245 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 PTPN20Q4JDL3 420 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 C22orf39Q6P5X5 142 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 SLC26A9Q7LBE3 791 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 TFAP2DQ7Z6R9 452 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 ELOA2Q8IYF1 753 aaPredicted RBP16.68■□□□□ 0.26
NPC1-205ENST00000587163 ZNF548Q8NEK5 533 aaPredicted RBP16.68■□□□□ 0.26
NPC1-205ENST00000587163 ZNF397Q8NF99 534 aaPredicted RBP16.68■□□□□ 0.26
NPC1-205ENST00000587163 OR7D4Q8NG98 312 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 MAPK15Q8TD08 544 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 KCNE4Q8WWG9 221 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 NPY6RQ99463 290 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 WDCPQ9H6R7 721 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 AJAP1Q9UKB5 411 aaPredicted RBP16.68■□□□□ 0.26
NPC1-205ENST00000587163 TRPM6Q9BX84 2022 aa16.68■□□□□ 0.26
NPC1-205ENST00000587163 SPTY2D1-AS1A0A0U1RR47 76 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 DRGXA6NNA5 263 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 J3QKU1 62 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 CASC3O15234 703 aaKnown RBP16.67■□□□□ 0.26
NPC1-205ENST00000587163 LZTS3O60299 673 aaPredicted RBP16.67■□□□□ 0.26
NPC1-205ENST00000587163 CSF2P04141 144 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 DUSP3P51452 185 aaPredicted RBP16.67■□□□□ 0.26
NPC1-205ENST00000587163 CLCN6P51797 869 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 UCNP55089 124 aa16.67■□□□□ 0.26
NPC1-205ENST00000587163 RNASE9P60153 205 aaKnown RBP16.67■□□□□ 0.26
NPC1-205ENST00000587163 HNRNPKP61978 463 aaKnown RBP eCLIP16.67■□□□□ 0.26
NPC1-205ENST00000587163 LY6DQ14210 128 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms