RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 ACBD5Q5T8D3 534 aaPredicted RBP19.79■□□□□ 0.76
TRAF4-216ENST00000586813 ERN2Q76MJ5 926 aaKnown RBP19.79■□□□□ 0.76
TRAF4-216ENST00000586813 XYLT1Q86Y38 959 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 FAM114A1Q8IWE2 563 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 OR7D4Q8NG98 312 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 C18orf8Q96DM3 657 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 TNKS2Q9H2K2 1166 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 TMEM51Q9NW97 253 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 IL36AQ9UHA7 158 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 FAM170AA1A519 330 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 PRKCSHP14314 528 aaPredicted RBP19.78■□□□□ 0.76
TRAF4-216ENST00000586813 DGKAP23743 735 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 FLT3P36888 993 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 EIF2S3P41091 472 aaKnown RBP19.78■□□□□ 0.76
TRAF4-216ENST00000586813 RECQLP46063 649 aaPredicted RBP19.78■□□□□ 0.76
TRAF4-216ENST00000586813 VWA3BQ502W6 1294 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 ARSIQ5FYB1 569 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 ARTNQ5T4W7 220 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 TRNP1Q6NT89 227 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 ERICH1Q86X53 443 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 CACTIN-AS1Q8N1I8 211 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 OR13H1Q8NG92 308 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 OR4C6Q8NH72 309 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 CALN1Q9BXU9 219 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 HDAC8Q9BY41 377 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 KLHL11Q9NVR0 708 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 UCKL1Q9NWZ5 548 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 ZNF212Q9UDV6 495 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 ZFR2Q9UPR6 939 aaKnown RBP19.78■□□□□ 0.76
TRAF4-216ENST00000586813 CLCA2Q9UQC9 943 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 FHOD1Q9Y613 1164 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 BPTFQ12830 3046 aa19.78■□□□□ 0.76
TRAF4-216ENST00000586813 ILVBLA1L0T0 632 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 LEFTY1O75610 366 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 PCDH8O95206 1070 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 ITPKBP27987 946 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 SERPINH1P50454 418 aaKnown RBP19.77■□□□□ 0.76
TRAF4-216ENST00000586813 C2CD6Q53TS8 623 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 TAF3Q5VWG9 929 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 SEL1L3Q68CR1 1132 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 ZNF783Q6ZMS7 281 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 GCNT7Q6ZNI0 430 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 DPY19L3Q6ZPD9 716 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 BNIPLQ7Z465 357 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 SLC22A18ASQ8N1D0 253 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 DCBLD1Q8N8Z6 715 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 PPP1R16AQ96I34 528 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 TUBGCP2Q9BSJ2 902 aa19.77■□□□□ 0.76
TRAF4-216ENST00000586813 GOLGA8SH3BPF8 625 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 FFAR2O15552 330 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 SRGAP2O75044 1071 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 ZNF821O75541 412 aaPredicted RBP19.76■□□□□ 0.75
TRAF4-216ENST00000586813 ZMPSTE24O75844 475 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 PIAS2O75928 621 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 ENDOD1O94919 500 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 LSM8O95777 96 aaKnown RBP19.76■□□□□ 0.75
TRAF4-216ENST00000586813 NEK3P51956 506 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 CLDN2P57739 230 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 DAB2P98082 770 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 DPCR1Q3MIW9 517 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 TMEM259Q4ZIN3 620 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 HS1BP3Q53T59 392 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 HSP90AA4PQ58FG1 418 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 RETSATQ6NUM9 610 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 ABI3BPQ7Z7G0 1075 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 SNIP1Q8TAD8 396 aaKnown RBP19.76■□□□□ 0.75
TRAF4-216ENST00000586813 CFAP57Q96MR6 1250 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 HAPLN3Q96S86 360 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 SPON2Q9BUD6 331 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 ZYG11BQ9C0D3 744 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 CEP44Q9C0F1 390 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 ATP13A1Q9HD20 1204 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 TMEM59LQ9UK28 342 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 WASF2Q9Y6W5 498 aa19.76■□□□□ 0.75
TRAF4-216ENST00000586813 BRINP1O60477 761 aa19.75■□□□□ 0.75
TRAF4-216ENST00000586813 GIMD1P0DJR0 217 aa19.75■□□□□ 0.75
TRAF4-216ENST00000586813 ADRB3P13945 408 aa19.75■□□□□ 0.75
TRAF4-216ENST00000586813 ITGB7P26010 798 aa19.75■□□□□ 0.75
TRAF4-216ENST00000586813 ARF5P84085 180 aa19.75■□□□□ 0.75
TRAF4-216ENST00000586813 E2F1Q01094 437 aa19.75■□□□□ 0.75
TRAF4-216ENST00000586813 KLHDC7AQ5VTJ3 777 aa19.75■□□□□ 0.75
TRAF4-216ENST00000586813 LRRC69Q6ZNQ3 347 aa19.75■□□□□ 0.75
TRAF4-216ENST00000586813 NOP9Q86U38 636 aaKnown RBP19.75■□□□□ 0.75
TRAF4-216ENST00000586813 FAM131BQ86XD5 332 aa19.75■□□□□ 0.75
TRAF4-216ENST00000586813 PCDH20Q8N6Y1 951 aaKnown RBP19.75■□□□□ 0.75
TRAF4-216ENST00000586813 MSANTD4Q8NCY6 345 aa19.75■□□□□ 0.75
TRAF4-216ENST00000586813 NAA15Q9BXJ9 866 aaKnown RBP19.75■□□□□ 0.75
TRAF4-216ENST00000586813 CAAP1Q9H8G2 361 aa19.75■□□□□ 0.75
TRAF4-216ENST00000586813 EIF4E1BA6NMX2 242 aaKnown RBP19.74■□□□□ 0.75
TRAF4-216ENST00000586813 A6NNZ2 444 aa19.74■□□□□ 0.75
TRAF4-216ENST00000586813 RRP8O43159 456 aaKnown RBP19.74■□□□□ 0.75
TRAF4-216ENST00000586813 NOMO3P69849 1222 aa19.74■□□□□ 0.75
TRAF4-216ENST00000586813 GNA12Q03113 381 aa19.74■□□□□ 0.75
TRAF4-216ENST00000586813 SLC20A2Q08357 652 aa19.74■□□□□ 0.75
TRAF4-216ENST00000586813 KIAA1161Q6NSJ0 714 aa19.74■□□□□ 0.75
TRAF4-216ENST00000586813 PTAR1Q7Z6K3 402 aaPredicted RBP19.74■□□□□ 0.75
TRAF4-216ENST00000586813 DRC7Q8IY82 874 aa19.74■□□□□ 0.75
TRAF4-216ENST00000586813 FAM174AQ8TBP5 190 aa19.74■□□□□ 0.75
TRAF4-216ENST00000586813 EPS8L1Q8TE68 723 aa19.74■□□□□ 0.75
TRAF4-216ENST00000586813 BAP1Q92560 729 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms